日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

STAPLE: automating spatial transcriptomics analysis and AI interpretation

STAPLE:自动化空间转录组学分析和人工智能解读

Lvovs, Dmitrijs; Quinn, Jeffrey; Forjaz, André; Santana-Cruz, Ivette; Stapleton, Orian; Vavikolanu, Kranthi; Wetzel, Meredith; Bernard, Vincent; Herb, Brian R; Favorov, Alexander; Kagohara, Luciane T; Kiemen, Ashley L; Maitra, Anirban; Sidiropoulos, Dimitrios N; Tansey, Wesley; Wood, Laura D; Deshpande, Atul; Noble, Michael; Fertig, Elana J

Inhibition of autophagy-lysosomal function exacerbates microglial and monocyte lipid metabolism reprograming and dysfunction after brain injury

抑制自噬-溶酶体功能会加剧脑损伤后小胶质细胞和单核细胞脂质代谢的重编程和功能障碍。

Mehrabani-Tabari, Amir A; Hegdekar, Nivedita; Herb, Brian R; Kachi, Sazia Arefin; Sarkar, Chinmoy; Thapa, Sagarina; Nguyen, Dexter Ph; Morel, Yulemni; Weldemariam, Mehari M; Muller, Ludovic; Temple Andrews, W; Cortes-Gutierrez, Marcia; Fan, Xiaoxuan; Ayithan, Natarajan; Pettyjohn-Robin, Olivia; Bustos, Sabrina; Greer, Lacey K; Gore, Jessica T; Kane, Maureen A; Ament, Seth A; Jones, Jace W; Lipinski, Marta M

The single-cell opioid responses in the context of HIV (SCORCH) consortium

HIV背景下的单细胞阿片类药物反应(SCORCH)联盟

Ament, Seth A; Campbell, Rianne R; Lobo, Mary Kay; Receveur, Joseph P; Agrawal, Kriti; Borjabad, Alejandra; Byrareddy, Siddappa N; Chang, Linda; Clarke, Declan; Emani, Prashant; Gabuzda, Dana; Gaulton, Kyle J; Giglio, Michelle; Giorgi, Federico M; Gok, Busra; Guda, Chittibabu; Hadas, Eran; Herb, Brian R; Hu, Wen; Huttner, Anita; Ishmam, Mohammad R; Jacobs, Michelle M; Kelschenbach, Jennifer; Kim, Dong-Wook; Lee, Cheyu; Liu, Shuhui; Liu, Xiaokun; Madras, Bertha K; Mahurkar, Anup A; Mash, Deborah C; Mukamel, Eran A; Niu, Meng; O'Connor, Richard M; Pagan, Chelsea M; Pang, Alina P S; Pillai, Piya; Repunte-Canonigo, Vez; Ruzicka, W Brad; Stanley, Jay; Tickle, Timothy; Tsai, Shang-Yi A; Wang, Allen; Wills, Lauren; Wilson, Alyssa M; Wright, Susan N; Xu, Siwei; Yang, Junchen; Zand, Maryam; Zhang, Le; Zhang, Jing; Akbarian, Schahram; Buch, Shilpa; Cheng, Christine S; Corley, Michael J; Fox, Howard S; Gerstein, Mark; Gummuluru, Suryaram; Heiman, Myriam; Ho, Ya-Chi; Kellis, Manolis; Kenny, Paul J; Kluger, Yuval; Milner, Teresa A; Moore, David J; Morgello, Susan; Ndhlovu, Lishomwa C; Rana, Tariq M; Sanna, Pietro Paolo; Satterlee, John S; Sestan, Nenad; Spector, Stephen A; Spudich, Serena; Tilgner, Hagen U; Volsky, David J; White, Owen R; Williams, Dionne W; Zeng, Hongkui

MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data

MAMS:矩阵和分析元数据标准,旨在促进单细胞数据的协调性和可重复性

Sarfraz, Irzam; Wang, Yichen; Shastry, Amulya; Teh, Wei Kheng; Sokolov, Artem; Herb, Brian R; Creasy, Heather H; Virshup, Isaac; Dries, Ruben; Degatano, Kylee; Mahurkar, Anup; Schnell, Daniel J; Madrigal, Pedro; Hilton, Jason; Gehlenborg, Nils; Tickle, Timothy; Campbell, Joshua D

The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain

神经科学多组学档案库:脑计划(BRAIN Initiative)旗下哺乳动物脑单细胞转录组学和表观基因组学数据资源

Ament, Seth A; Adkins, Ricky S; Carter, Robert; Chrysostomou, Elena; Colantuoni, Carlo; Crabtree, Jonathan; Creasy, Heather H; Degatano, Kylee; Felix, Victor; Gandt, Peter; Garden, Gwenn A; Giglio, Michelle; Herb, Brian R; Khajouei, Farzaneh; Kiernan, Elizabeth; McCracken, Carrie; McDaniel, Kennedy; Nadendla, Suvarna; Nickel, Lance; Olley, Dustin; Orvis, Joshua; Receveur, Joseph P; Schor, Mike; Sonthalia, Shreyash; Tickle, Timothy L; Way, Jessica; Hertzano, Ronna; Mahurkar, Anup A; White, Owen R

A guide to the BRAIN Initiative Cell Census Network data ecosystem

脑计划细胞普查网络数据生态系统指南

Hawrylycz, Michael; Martone, Maryann E; Ascoli, Giorgio A; Bjaalie, Jan G; Dong, Hong-Wei; Ghosh, Satrajit S; Gillis, Jesse; Hertzano, Ronna; Haynor, David R; Hof, Patrick R; Kim, Yongsoo; Lein, Ed; Liu, Yufeng; Miller, Jeremy A; Mitra, Partha P; Mukamel, Eran; Ng, Lydia; Osumi-Sutherland, David; Peng, Hanchuan; Ray, Patrick L; Sanchez, Raymond; Regev, Aviv; Ropelewski, Alex; Scheuermann, Richard H; Tan, Shawn Zheng Kai; Thompson, Carol L; Tickle, Timothy; Tilgner, Hagen; Varghese, Merina; Wester, Brock; White, Owen; Zeng, Hongkui; Aevermann, Brian; Allemang, David; Ament, Seth; Athey, Thomas L; Baker, Cody; Baker, Katherine S; Baker, Pamela M; Bandrowski, Anita; Banerjee, Samik; Bishwakarma, Prajal; Carr, Ambrose; Chen, Min; Choudhury, Roni; Cool, Jonah; Creasy, Heather; D'Orazi, Florence; Degatano, Kylee; Dichter, Benjamin; Ding, Song-Lin; Dolbeare, Tim; Ecker, Joseph R; Fang, Rongxin; Fillion-Robin, Jean-Christophe; Fliss, Timothy P; Gee, James; Gillespie, Tom; Gouwens, Nathan; Zhang, Guo-Qiang; Halchenko, Yaroslav O; Harris, Nomi L; Herb, Brian R; Hintiryan, Houri; Hood, Gregory; Horvath, Sam; Huo, Bingxing; Jarecka, Dorota; Jiang, Shengdian; Khajouei, Farzaneh; Kiernan, Elizabeth A; Kir, Huseyin; Kruse, Lauren; Lee, Changkyu; Lelieveldt, Boudewijn; Li, Yang; Liu, Hanqing; Liu, Lijuan; Markuhar, Anup; Mathews, James; Mathews, Kaylee L; Mezias, Chris; Miller, Michael I; Mollenkopf, Tyler; Mufti, Shoaib; Mungall, Christopher J; Orvis, Joshua; Puchades, Maja A; Qu, Lei; Receveur, Joseph P; Ren, Bing; Sjoquist, Nathan; Staats, Brian; Tward, Daniel; van Velthoven, Cindy T J; Wang, Quanxin; Xie, Fangming; Xu, Hua; Yao, Zizhen; Yun, Zhixi; Zhang, Yun Renee; Zheng, W Jim; Zingg, Brian

Cochlear organoids reveal transcriptional programs of postnatal hair cell differentiation from supporting cells.

耳蜗类器官揭示了出生后毛细胞从支持细胞分化的转录程序

Kalra Gurmannat, Lenz Danielle, Abdul-Aziz Dunia, Hanna Craig, Basu Mahashweta, Herb Brian R, Colantuoni Carlo, Milon Beatrice, Saxena Madhurima, Shetty Amol C, Hertzano Ronna, Shivdasani Ramesh A, Ament Seth A, Edge Albert S B

Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse

作者更正:人类、狨猴和小鼠运动皮层的比较细胞分析

Bakken, Trygve E; Jorstad, Nikolas L; Hu, Qiwen; Lake, Blue B; Tian, Wei; Kalmbach, Brian E; Crow, Megan; Hodge, Rebecca D; Krienen, Fenna M; Sorensen, Staci A; Eggermont, Jeroen; Yao, Zizhen; Aevermann, Brian D; Aldridge, Andrew I; Bartlett, Anna; Bertagnolli, Darren; Casper, Tamara; Castanon, Rosa G; Crichton, Kirsten; Daigle, Tanya L; Dalley, Rachel; Dee, Nick; Dembrow, Nikolai; Diep, Dinh; Ding, Song-Lin; Dong, Weixiu; Fang, Rongxin; Fischer, Stephan; Goldman, Melissa; Goldy, Jeff; Graybuck, Lucas T; Herb, Brian R; Hou, Xiaomeng; Kancherla, Jayaram; Kroll, Matthew; Lathia, Kanan; van Lew, Baldur; Li, Yang Eric; Liu, Christine S; Liu, Hanqing; Lucero, Jacinta D; Mahurkar, Anup; McMillen, Delissa; Miller, Jeremy A; Moussa, Marmar; Nery, Joseph R; Nicovich, Philip R; Niu, Sheng-Yong; Orvis, Joshua; Osteen, Julia K; Owen, Scott; Palmer, Carter R; Pham, Thanh; Plongthongkum, Nongluk; Poirion, Olivier; Reed, Nora M; Rimorin, Christine; Rivkin, Angeline; Romanow, William J; Sedeño-Cortés, Adriana E; Siletti, Kimberly; Somasundaram, Saroja; Sulc, Josef; Tieu, Michael; Torkelson, Amy; Tung, Herman; Wang, Xinxin; Xie, Fangming; Yanny, Anna Marie; Zhang, Renee; Ament, Seth A; Behrens, M Margarita; Bravo, Hector Corrada; Chun, Jerold; Dobin, Alexander; Gillis, Jesse; Hertzano, Ronna; Hof, Patrick R; Höllt, Thomas; Horwitz, Gregory D; Keene, C Dirk; Kharchenko, Peter V; Ko, Andrew L; Lelieveldt, Boudewijn P; Luo, Chongyuan; Mukamel, Eran A; Pinto-Duarte, António; Preiss, Sebastian; Regev, Aviv; Ren, Bing; Scheuermann, Richard H; Smith, Kimberly; Spain, William J; White, Owen R; Koch, Christof; Hawrylycz, Michael; Tasic, Bosiljka; Macosko, Evan Z; McCarroll, Steven A; Ting, Jonathan T; Zeng, Hongkui; Zhang, Kun; Feng, Guoping; Ecker, Joseph R; Linnarsson, Sten; Lein, Ed S

Single-Nucleus RNA-Seq Reveals Dysregulation of Striatal Cell Identity Due to Huntington's Disease Mutations

单核RNA测序揭示亨廷顿病突变导致纹状体细胞身份失调

Malaiya, Sonia; Cortes-Gutierrez, Marcia; Herb, Brian R; Coffey, Sydney R; Legg, Samuel R W; Cantle, Jeffrey P; Colantuoni, Carlo; Carroll, Jeffrey B; Ament, Seth A

Defense against territorial intrusion is associated with DNA methylation changes in the honey bee brain

蜜蜂大脑中的DNA甲基化变化与抵御领地入侵有关。

Herb, Brian R; Shook, Molly S; Fields, Christopher J; Robinson, Gene E