日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Cooltools: Enabling high-resolution Hi-C analysis in Python

Cooltools:在 Python 中实现高分辨率 Hi-C 分析

Abdennur, Nezar; Abraham, Sameer; Fudenberg, Geoffrey; Flyamer, Ilya M; Galitsyna, Aleksandra A; Goloborodko, Anton; Imakaev, Maxim; Oksuz, Betul A; Venev, Sergey V; Xiao, Yao

Pairtools: From sequencing data to chromosome contacts

Pairtools:从测序数据到染色体接触分析

Abdennur, Nezar; Fudenberg, Geoffrey; Flyamer, Ilya M; Galitsyna, Aleksandra A; Goloborodko, Anton; Imakaev, Maxim; Venev, Sergey V

Bioframe: operations on genomic intervals in Pandas dataframes

Bioframe:Pandas 数据框中基因组区间的操作

Abdennur, Nezar; Fudenberg, Geoffrey; Flyamer, Ilya M; Galitsyna, Aleksandra A; Goloborodko, Anton; Imakaev, Maxim; Venev, Sergey

Crumpled polymer with loops recapitulates key features of chromosome organization

具有环状结构的褶皱聚合物重现了染色体组织的关键特征

Polovnikov, Kirill E; Slavov, Bogdan; Belan, Sergey; Imakaev, Maxim; Brandão, Hugo B; Mirny, Leonid A

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers

多种沉默染色质状态调节基因组区室化和环挤出屏障

Spracklin, George; Abdennur, Nezar; Imakaev, Maxim; Chowdhury, Neil; Pradhan, Sriharsa; Mirny, Leonid A; Dekker, Job

Pairtools: from sequencing data to chromosome contacts

Pairtools:从测序数据到染色体接触分析

Abdennur, Nezar; Fudenberg, Geoffrey; Flyamer, Ilya M; Galitsyna, Aleksandra A; Goloborodko, Anton; Imakaev, Maxim; Venev, Sergey V

Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques

使用转录组定量技术估计废水中 SARS-CoV-2 的谱系丰度

Jasmijn A Baaijens #, Alessandro Zulli #, Isabel M Ott #, Ioanna Nika, Mart J van der Lugt, Mary E Petrone, Tara Alpert, Joseph R Fauver, Chaney C Kalinich, Chantal B F Vogels, Mallery I Breban, Claire Duvallet, Kyle A McElroy, Newsha Ghaeli, Maxim Imakaev, Malaika F Mckenzie-Bennett, Keith Robison,

Nationwide Trends in COVID-19 Cases and SARS-CoV-2 RNA Wastewater Concentrations in the United States

美国全国范围内 COVID-19 病例和 SARS-CoV-2 RNA 废水浓度趋势

Claire Duvallet, Fuqing Wu, Kyle A McElroy, Maxim Imakaev, Noriko Endo, Amy Xiao, Jianbo Zhang, Róisín Floyd-O'Sullivan, Morgan M Powell, Samuel Mendola, Shane T Wilson, Francis Cruz, Tamar Melman, Chaithra Lakshmi Sathyanarayana, Scott W Olesen, Timothy B Erickson, Newsha Ghaeli, Peter Chai, Eric J

Making waves: Defining the lead time of wastewater-based epidemiology for COVID-19

掀起波澜:确定基于废水的 COVID-19 流行病学预警时间

Olesen, Scott W; Imakaev, Maxim; Duvallet, Claire

Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification

使用 RNA-Seq 定量方法估计废水中 SARS-CoV-2 的变异丰度

Jasmijn A Baaijens, Alessandro Zulli, Isabel M Ott, Mary E Petrone, Tara Alpert, Joseph R Fauver, Chaney C Kalinich, Chantal B F Vogels, Mallery I Breban, Claire Duvallet, Kyle McElroy, Newsha Ghaeli, Maxim Imakaev, Malaika Mckenzie-Bennett, Keith Robison, Alex Plocik, Rebecca Schilling, Martha Pier