日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers

不使用唯一分子标识符的单细胞RNA测序读数分位数归一化

Townes, F William; Irizarry, Rafael A

An image-based transcriptomics atlas reveals the regional and microbiota-dependent molecular, cellular, and spatial structure of the murine gut

基于图像的转录组学图谱揭示了小鼠肠道的区域性和微生物群依赖性的分子、细胞和空间结构

Xu, Rosalind J; Zhang, Hao; Cadinu, Paolo; Nicol, Phillip B; Herrmann, Uli S; Lee, Tyrone; Geistlinger, Ludwig; Irizarry, Rafael A; Moffitt, Jeffrey R

An image-based transcriptomics atlas reveals the regional and microbiota-dependent molecular, cellular, and spatial structure of the murine gut

基于图像的转录组学图谱揭示了小鼠肠道的区域性和微生物群依赖性的分子、细胞和空间结构

Xu, Rosalind J; Cadinu, Paolo; Nicol, Phillip B; Herrmann, Uli S; Lee, Tyrone; Geistlinger, Ludwig; Irizarry, Rafael A; Moffitt, Jeffrey R

Identifying spatially variable genes by projecting to morphologically relevant curves

通过投影到形态学相关曲线来识别空间变异基因

Nicol, Phillip B; Ma, Rong; Xu, Rosalind J; Moffitt, Jeffrey R; Irizarry, Rafael A

Baseline immune state and T-cell clonal kinetics are associated with durable response to CAR-T therapy in large B-cell lymphoma

基线免疫状态和T细胞克隆动力学与大B细胞淋巴瘤患者对CAR-T疗法的持久反应相关

Maurer, Katie; Grabski, Isabella N; Houot, Roch; Gohil, Satyen H; Miura, Shogo; Redd, Robert; Lyu, Haoxiang; Lu, Wesley; Arihara, Yohei; Budka, Justin; McDonough, Mikaela; Ansuinelli, Michela; Reynolds, Carol; Jacene, Heather; Li, Shuqiang; Livak, Kenneth J; Ritz, Jerome; Miles, Brodie; Mattie, Mike; Neuberg, Donna S; Irizarry, Rafael A; Armand, Philippe; Wu, Catherine J; Jacobson, Caron

DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues.

对同源域中罕见变异体的DNA结合分析揭示了决定同源域特异性的残基

Kock Kian Hong, Kimes Patrick K, Gisselbrecht Stephen S, Inukai Sachi, Phanor Sabrina K, Anderson James T, Ramakrishnan Gayatri, Lipper Colin H, Song Dongyuan, Kurland Jesse V, Rogers Julia M, Jeong Raehoon, Blacklow Stephen C, Irizarry Rafael A, Bulyk Martha L

Detection of allele-specific expression in spatial transcriptomics with spASE

利用 spASE 检测空间转录组学中的等位基因特异性表达

Zou, Luli S; Cable, Dylan M; Barrera-Lopez, Irving A; Zhao, Tongtong; Murray, Evan; Aryee, Martin J; Chen, Fei; Irizarry, Rafael A

Effects of KRAS Genetic Interactions on Outcomes in Cancers of the Lung, Pancreas, and Colorectum

KRAS基因相互作用对肺癌、胰腺癌和结直肠癌预后的影响

Grabski, Isabella N; Heymach, John V; Kehl, Kenneth L; Kopetz, Scott; Lau, Ken S; Riely, Gregory J; Schrag, Deborah; Yaeger, Rona; Irizarry, Rafael A; Haigis, Kevin M

Significance analysis for clustering with single-cell RNA-sequencing data

基于单细胞RNA测序数据的聚类显著性分析

Grabski, Isabella N; Street, Kelly; Irizarry, Rafael A

Cell type-specific inference of differential expression in spatial transcriptomics

空间转录组学中细胞类型特异性差异表达推断

Cable, Dylan M; Murray, Evan; Shanmugam, Vignesh; Zhang, Simon; Zou, Luli S; Diao, Michael; Chen, Haiqi; Macosko, Evan Z; Irizarry, Rafael A; Chen, Fei