日期 影响因子
日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:
–

Clonal interference and changing selective pressures shape the escape of SARS-CoV-2 from hundreds of antibodies

克隆干扰和不断变化的选择压力影响着SARS-CoV-2病毒逃避数百种抗体的能力

期刊:Virus Evolution
影响因子:4
doi:10.1093/ve/veaf104
Haddox, Hugh K; Abdel Aziz, Omar; Galloway, Jared G; Kent, Javen; Cooper, Cameron R; Jennings-Shaffer, Chris; Dumm, Will; Temple, Seth D; Bloom, Jesse D; Matsen, Frederick A 4th
微生物学
SARS-CoV-2
发表日期：2026
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Unifying phylogenetic traversal and deep learning to guide tree exploration

融合系统发育遍历和深度学习以指导树探索

期刊:
影响因子:
doi:10.64898/2026.01.14.699358
Collienne, Lena; Richman, Harry; Rich, David H; Barker, Mary; Jennings-Shaffer, Chris; Matsen, Frederick A 4th
发育与干细胞
发表日期：2026
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The mutation rate of SARS-CoV-2 is highly variable between sites and is influenced by sequence context, genomic region, and RNA structure

SARS-CoV-2的突变率在不同位点之间差异很大，并受序列环境、基因组区域和RNA结构的影响。

期刊:Nucleic Acids Research
影响因子:13.1
doi:10.1093/nar/gkaf503
Haddox, Hugh K; Angehrn, Georg; Sesta, Luca; Jennings-Shaffer, Chris; Temple, Seth D; Galloway, Jared G; Hinrichs, Angie S; DeWitt, William S; Bloom, Jesse D; Iv, Frederick A Matsen; Neher, Richard A
SARS-CoV-2
发表日期：2025
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Finding high posterior density phylogenies by systematically extending a directed acyclic graph

通过系统地扩展有向无环图来寻找高后验密度系统发育树

期刊:Algorithms for Molecular Biology
影响因子:1.7
doi:10.1186/s13015-025-00273-x
Jennings-Shaffer, Chris; Rich, David H; Macaulay, Matthew; Karcher, Michael D; Ganapathy, Tanvi; Kiami, Shosuke; Kooperberg, Anna; Zhang, Cheng; Suchard, Marc A; Matsen, Frederick A 4th
发育与干细胞
发表日期：2025
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The mutation rate of SARS-CoV-2 is highly variable between sites and is influenced by sequence context, genomic region, and RNA structure

SARS-CoV-2的突变率在不同位点之间差异很大，并受序列环境、基因组区域和RNA结构的影响。

期刊:
影响因子:
doi:10.1101/2025.01.07.631013
Haddox, Hugh K; Angehrn, Georg; Sesta, Luca; Jennings-Shaffer, Chris; Temple, Seth D; Galloway, Jared G; DeWitt, William S; Bloom, Jesse D; Matsen, Frederick A 4th; Neher, Richard A
SARS-CoV-2
发表日期：2025
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Replaying germinal center evolution on a quantified affinity landscape.

在量化的亲和力景观上重现胚胎中心演化

期刊:
影响因子:
doi:10.1101/2025.06.02.656870
DeWitt William S, Vora Ashni A, Araki Tatsuya, Galloway Jared G, Alkutkar Tanwee, Bortolatto Juliana, Castro Tiago B R, Dumm Will, Jennings-Shaffer Chris, Jia Tongqiu, Mesin Luka, Ozorowski Gabriel, Pae Juhee, Ralph Duncan K, Bloom Jesse D, Nourmohammad Armita, Song Yun S, Ward Andrew B, Starr Tyler N, Matsen Frederick A 4th, Victora Gabriel D
心血管
发表日期：2025
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A topology-marginal composite likelihood via a generalized phylogenetic pruning algorithm

基于广义系统发育剪枝算法的拓扑边缘复合似然

期刊:Algorithms for Molecular Biology
影响因子:1.7
doi:10.1186/s13015-023-00235-1
Jun, Seong-Hwan; Nasif, Hassan; Jennings-Shaffer, Chris; Rich, David H; Kooperberg, Anna; Fourment, Mathieu; Zhang, Cheng; Suchard, Marc A; Matsen, Frederick A 4th
发育与干细胞
发表日期：2023
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