日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Sediment and groundwater metagenomes from subsurface microbial communities from the Oak Ridge National Laboratory Oak Ridge Reservation, Oak Ridge, Tennessee, USA

来自美国田纳西州橡树岭国家实验室橡树岭保护区地下微生物群落的沉积物和地下水宏基因组

Lui, Lauren M; Nielsen, Torben N; Smith, Heidi J; Chandonia, John-Marc; Kuehl, Jennifer V; Song, Fangchao; Sczesnak, Andrew; Hendrickson, Andrew; Hazen, Terry C; Fields, Matthew W; Arkin, Adam P

Genomic and environmental controls on Castellaniella biogeography in an anthropogenically disturbed subsurface

人类活动干扰地下环境中 Castellaniella 生物地理学的基因组和环境控制

Jennifer L Goff #, Elizabeth G Szink #, Konnor L Durrence, Lauren M Lui, Torben N Nielsen, Jennifer V Kuehl, Kristopher A Hunt, John-Marc Chandonia, Jiawen Huang, Michael P Thorgersen, Farris L Poole 2nd, David A Stahl, Romy Chakraborty, Adam M Deutschbauer, Adam P Arkin, Michael W W Adams

Large-scale genetic characterization of the model sulfate-reducing bacterium, Desulfovibrio vulgaris Hildenborough

对模式硫酸盐还原菌希尔登堡脱硫弧菌(Desulfovibrio vulgaris Hildenborough)进行大规模遗传表征

Trotter, Valentine V; Shatsky, Maxim; Price, Morgan N; Juba, Thomas R; Zane, Grant M; De León, Kara B; Majumder, Erica L-W; Gui, Qin; Ali, Rida; Wetmore, Kelly M; Kuehl, Jennifer V; Arkin, Adam P; Wall, Judy D; Deutschbauer, Adam M; Chandonia, John-Marc; Butland, Gareth P

The immune checkpoint B7x expands tumor-infiltrating Tregs and promotes resistance to anti-CTLA-4 therapy

免疫检查点 B7x 可扩增肿瘤浸润性 Treg 并促进对抗 CTLA-4 疗法的耐药性

Peter John, Marc C Pulanco, Phillip M Galbo Jr, Yao Wei, Kim C Ohaegbulam, Deyou Zheng, Xingxing Zang

SCOPe: improvements to the structural classification of proteins - extended database to facilitate variant interpretation and machine learning

SCOPe:改进蛋白质结构分类——扩展数据库以促进变异解读和机器学习

Chandonia, John-Marc; Guan, Lindsey; Lin, Shiangyi; Yu, Changhua; Fox, Naomi K; Brenner, Steven E

Ecophysiological and genomic analyses of a representative isolate of highly abundant Bacillus cereus strains in contaminated subsurface sediments

受污染地下沉积物中大量存在的蜡状芽孢杆菌菌株的代表性分离株的生态生理学和基因组分析

Jennifer L Goff, Elizabeth G Szink, Michael P Thorgersen, Andrew D Putt, Yupeng Fan, Lauren M Lui, Torben N Nielsen, Kristopher A Hunt, Jonathan P Michael, Yajiao Wang, Daliang Ning, Ying Fu, Joy D Van Nostrand, Farris L Poole 2nd, John-Marc Chandonia, Terry C Hazen, David A Stahl, Jizhong Zhou, Ada

CORAL: A framework for rigorous self-validated data modeling and integrative, reproducible data analysis

CORAL:一个用于严格的自我验证数据建模和集成、可复现数据分析的框架

Novichkov, Pavel S; Chandonia, John-Marc; Arkin, Adam P

Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities"

对 Vangay 等人的论文“微生物组元数据标准:国家微生物组数据合作研讨会及后续活动报告”的更正

Vangay, Pajau; Burgin, Josephine; Johnston, Anjanette; Beck, Kristen L; Berrios, Daniel C; Blumberg, Kai; Canon, Shane; Chain, Patrick; Chandonia, John-Marc; Christianson, Danielle; Costes, Sylvain V; Damerow, Joan; Duncan, William D; Dundore-Arias, Jose Pablo; Fagnan, Kjiersten; Galazka, Jonathan M; Gibbons, Sean M; Hays, David; Hervey, Judson; Hu, Bin; Hurwitz, Bonnie L; Jaiswal, Pankaj; Joachimiak, Marcin P; Kinkel, Linda; Ladau, Joshua; Martin, Stanton L; McCue, Lee Ann; Miller, Kayd; Mouncey, Nigel; Mungall, Chris; Pafilis, Evangelos; Reddy, T B K; Richardson, Lorna; Roux, Simon; Schriml, Lynn M; Shaffer, Justin P; Sundaramurthi, Jagadish Chandrabose; Thompson, Luke R; Timme, Ruth E; Zheng, Jie; Wood-Charlson, Elisha M; Eloe-Fadrosh, Emiley A

Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance

地下水噬菌体的生态基因组学表明,生态位分化与特定的环境耐受性有关

Kothari, Ankita; Roux, Simon; Zhang, Hanqiao; Prieto, Anatori; Soneja, Drishti; Chandonia, John-Marc; Spencer, Sarah; Wu, Xiaoqin; Altenburg, Sara; Fields, Matthew W; Deutschbauer, Adam M; Arkin, Adam P; Alm, Eric J; Chakraborty, Romy; Mukhopadhyay, Aindrila

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities

微生物组元数据标准:国家微生物组数据合作研讨会及后续活动报告

Vangay, Pajau; Burgin, Josephine; Johnston, Anjanette; Beck, Kristen L; Berrios, Daniel C; Blumberg, Kai; Canon, Shane; Chain, Patrick; Chandonia, John-Marc; Christianson, Danielle; Costes, Sylvain V; Damerow, Joan; Duncan, William D; Dundore-Arias, Jose Pablo; Fagnan, Kjiersten; Galazka, Jonathan M; Gibbons, Sean M; Hays, David; Hervey, Judson; Hu, Bin; Hurwitz, Bonnie L; Jaiswal, Pankaj; Joachimiak, Marcin P; Kinkel, Linda; Ladau, Joshua; Martin, Stanton L; McCue, Lee Ann; Miller, Kayd; Mouncey, Nigel; Mungall, Chris; Pafilis, Evangelos; Reddy, T B K; Richardson, Lorna; Roux, Simon; Schriml, Lynn M; Shaffer, Justin P; Sundaramurthi, Jagadish Chandrabose; Thompson, Luke R; Timme, Ruth E; Zheng, Jie; Wood-Charlson, Elisha M; Eloe-Fadrosh, Emiley A