日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Federated single-cell QTL meta-analysis reveals novel disease mechanisms

联合单细胞QTL荟萃分析揭示了新的疾病机制

Kaptijn, Daniel; Michielsen, Lieke; Neavin, Drew; Ripoll-Cladellas, Aida; Alquicira-Hernández, José; Korshevniuk, Maryna; Lee, Jimmy Tsz Hang; Oelen, Roy; Vochteloo, Martijn; Warmerdam, Robert; Ando, Yoshinari; Ban, Maria; Bayaraa, Odmaa; Berg, Marijn; van Blokland, Irene; Considine, Daniel; Dieng, Mame M; Edahiro, Ryuya; Gordon, M Grace; Groot, Hilde E; van der Harst, Pim; Heinig, Matthias; Hon, Chung-Chau; Idaghdour, Youssef; Kathail, Pooja; de Klein, Niek; Li, Wenchao; Li, Yang; Losert, Corinna; Manikanda, Vinu; Moody, Jonathan; Naeem, Haroon; Mokrab, Younes; Nawijn, Martijn C; Netea, Mihai; Niewold, Jelmer; Okada, Yukinori; Sawcer, Stephen; Soulama, Issiaka; Stegle, Oliver; Tsepilov, Yakov; Park, Woong-Yang; Rajagopalan, Deepa; Shahin, Tala; Shin, Jay W; Trynka, Gosia; Võsa, Urmo; Westra, Harm-Jan; Yazar, Seyhan; Ye, Jimmie; Zhang, Zhenhua; Hemberg, Martin; Mahfouz, Ahmed; Melé, Marta; Powell, Joseph E; Bonder, Marc Jan; Franke, Lude; van der Wijst, Monique G P

Determining gene specificity from multivariate single-cell RNA sequencing data

利用多变量单细胞RNA测序数据确定基因特异性

Swarna, Nikhila P; Booeshaghi, A Sina; Rebboah, Elisabeth; Gordon, M Grace; Kathail, Pooja; Li, Taibo; Alvarez, Marcus; Ye, Chun Jimmie; Wold, Barbara; Mortazavi, Ali; Pachter, Lior

Current genomic deep learning models display decreased performance in cell type-specific accessible regions

当前基因组深度学习模型在细胞类型特异性可及区域的性能有所下降

Kathail, Pooja; Shuai, Richard W; Chung, Ryan; Ye, Chun Jimmie; Loeb, Gabriel B; Ioannidis, Nilah M

Variants in tubule epithelial regulatory elements mediate most heritable differences in human kidney function

肾小管上皮调节元件的变异介导人类肾功能的大多数可遗传差异

Gabriel B Loeb, Pooja Kathail, Richard Shuai, Ryan Chung, Reinier J Grona, Sailaja Peddada, Volkan Sevim, Scot Federman, Karl Mader, Audrey Chu, Jonathan Davitte, Juan Du, Alexander R Gupta, Chun Jimmie Ye, Shawn Shafer, Laralynne Przybyla, Radu Rapiteanu, Nilah Ioannidis, Jeremy F Reiter

Current genomic deep learning models display decreased performance in cell type specific accessible regions

当前基因组深度学习模型在细胞类型特异性可及区域的性能有所下降

Kathail, Pooja; Shuai, Richard W; Chung, Ryan; Ye, Chun Jimmie; Loeb, Gabriel B; Ioannidis, Nilah M

Variants in tubule epithelial regulatory elements mediate most heritable differences in human kidney function

肾小管上皮调控元件的变异介导了人类肾功能的大部分遗传差异。

Loeb, Gabriel B; Kathail, Pooja; Shuai, Richard W; Chung, Ryan; Grona, Reinier J; Peddada, Sailaja; Sevim, Volkan; Federman, Scot; Mader, Karl; Chu, Audrey Y; Davitte, Jonathan; Du, Juan; Gupta, Alexander R; Ye, Chun Jimmie; Shafer, Shawn; Przybyla, Laralynne; Rapiteanu, Radu; Ioannidis, Nilah M; Reiter, Jeremy F

Personal transcriptome variation is poorly explained by current genomic deep learning models

目前的基因组深度学习模型对个体转录组变异的解释力较差。

Huang, Connie; Shuai, Richard W; Baokar, Parth; Chung, Ryan; Rastogi, Ruchir; Kathail, Pooja; Ioannidis, Nilah M

Wishbone identifies bifurcating developmental trajectories from single-cell data

Wishbone 从单细胞数据中识别出分叉的发育轨迹

Setty, Manu; Tadmor, Michelle D; Reich-Zeliger, Shlomit; Angel, Omer; Salame, Tomer Meir; Kathail, Pooja; Choi, Kristy; Bendall, Sean; Friedman, Nir; Pe'er, Dana