日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Complete sequencing of ape genomes

猿类基因组的完全测序

Yoo, DongAhn; Rhie, Arang; Hebbar, Prajna; Antonacci, Francesca; Logsdon, Glennis A; Solar, Steven J; Antipov, Dmitry; Pickett, Brandon D; Safonova, Yana; Montinaro, Francesco; Luo, Yanting; Malukiewicz, Joanna; Storer, Jessica M; Lin, Jiadong; Sequeira, Abigail N; Mangan, Riley J; Hickey, Glenn; Monfort Anez, Graciela; Balachandran, Parithi; Bankevich, Anton; Beck, Christine R; Biddanda, Arjun; Borchers, Matthew; Bouffard, Gerard G; Brannan, Emry; Brooks, Shelise Y; Carbone, Lucia; Carrel, Laura; Chan, Agnes P; Crawford, Juyun; Diekhans, Mark; Engelbrecht, Eric; Feschotte, Cedric; Formenti, Giulio; Garcia, Gage H; de Gennaro, Luciana; Gilbert, David; Green, Richard E; Guarracino, Andrea; Gupta, Ishaan; Haddad, Diana; Han, Junmin; Harris, Robert S; Hartley, Gabrielle A; Harvey, William T; Hiller, Michael; Hoekzema, Kendra; Houck, Marlys L; Jeong, Hyeonsoo; Kamali, Kaivan; Kellis, Manolis; Kille, Bryce; Lee, Chul; Lee, Youngho; Lees, William; Lewis, Alexandra P; Li, Qiuhui; Loftus, Mark; Loh, Yong Hwee Eddie; Loucks, Hailey; Ma, Jian; Mao, Yafei; Martinez, Juan F I; Masterson, Patrick; McCoy, Rajiv C; McGrath, Barbara; McKinney, Sean; Meyer, Britta S; Miga, Karen H; Mohanty, Saswat K; Munson, Katherine M; Pal, Karol; Pennell, Matt; Pevzner, Pavel A; Porubsky, David; Potapova, Tamara; Ringeling, Francisca R; Rocha, Joana L; Ryder, Oliver A; Sacco, Samuel; Saha, Swati; Sasaki, Takayo; Schatz, Michael C; Schork, Nicholas J; Shanks, Cole; Smeds, Linnéa; Son, Dongmin R; Steiner, Cynthia; Sweeten, Alexander P; Tassia, Michael G; Thibaud-Nissen, Françoise; Torres-González, Edmundo; Trivedi, Mihir; Wei, Wenjie; Wertz, Julie; Yang, Muyu; Zhang, Panpan; Zhang, Shilong; Zhang, Yang; Zhang, Zhenmiao; Zhao, Sarah A; Zhu, Yixin; Jarvis, Erich D; Gerton, Jennifer L; Rivas-González, Iker; Paten, Benedict; Szpiech, Zachary A; Huber, Christian D; Lenz, Tobias L; Konkel, Miriam K; Yi, Soojin V; Canzar, Stefan; Watson, Corey T; Sudmant, Peter H; Molloy, Erin; Garrison, Erik; Lowe, Craig B; Ventura, Mario; O'Neill, Rachel J; Koren, Sergey; Makova, Kateryna D; Phillippy, Adam M; Eichler, Evan E

Seqwin: Ultrafast identification of signature sequences in microbial genomes

Seqwin:微生物基因组中特征序列的超快速识别

Wang, Michael X; Kille, Bryce; Nute, Michael G; Zhou, Siyi; Stadler, Lauren B; Treangen, Todd J

Strainify: Strain-Level Microbiome Profiling for Low-Coverage Short-Read Metagenomic Datasets

Strainify:用于低覆盖率短读长宏基因组数据集的菌株水平微生物组分析

Luo, Rossie S; Kille, Bryce; Vaughan, Ellen E; Clark, Justin R; Maresso, Anthony W; Nute, Michael G; Treangen, Todd J

Ultra-high throughput mapping of genetic design space

超高通量基因设计空间作图

Rai, Kshitij; O'Connell, Ronan W; Piepergerdes, Trenton C; Wang, Yiduo; Brown, Lucas B C; Samra, Kian D; Wilson, Jack A; Lin, Shujian; Zhang, Thomas H; Ramos, Eduardo M; Sun, Andrew; Kille, Bryce; Curry, Kristen D; Rocks, Jason W; Treangen, Todd J; Mehta, Pankaj; Bashor, Caleb J

Parsnp 2.0: scalable core-genome alignment for massive microbial datasets

Parsnp 2.0:用于大规模微生物数据集的可扩展核心基因组比对

Kille, Bryce; Nute, Michael G; Huang, Victor; Kim, Eddie; Phillippy, Adam M; Treangen, Todd J

Catalytic Site Proximity Profiling for Functional Unification of Sequence-Diverse Radical S-Adenosylmethionine Enzymes

利用催化位点邻近性分析实现序列多样化的自由基S-腺苷甲硫氨酸酶的功能统一

Precord, Timothy W; Ramesh, Sangeetha; Dommaraju, Shravan R; Harris, Lonnie A; Kille, Bryce L; Mitchell, Douglas A

Olivar: automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens.

Olivar:用于病原体多重拼接扩增子测序的自动化变异感知引物设计

Wang Michael X, Lou Esther G, Sapoval Nicolae, Kim Eddie, Kalvapalle Prashant, Kille Bryce, Elworth R A Leo, Liu Yunxi, Fu Yilei, Stadler Lauren B, Treangen Todd J

Rescuing low frequency variants within intra-host viral populations directly from Oxford Nanopore sequencing data

直接从牛津纳米孔测序数据中拯救宿主内病毒群体中的低频变异株

Liu, Yunxi; Kearney, Joshua; Mahmoud, Medhat; Kille, Bryce; Sedlazeck, Fritz J; Treangen, Todd J

SeqScreen: accurate and sensitive functional screening of pathogenic sequences via ensemble learning

SeqScreen:通过集成学习对致病序列进行准确灵敏的功能筛选

Balaji, Advait; Kille, Bryce; Kappell, Anthony D; Godbold, Gene D; Diep, Madeline; Elworth, R A Leo; Qian, Zhiqin; Albin, Dreycey; Nasko, Daniel J; Shah, Nidhi; Pop, Mihai; Segarra, Santiago; Ternus, Krista L; Treangen, Todd J

Multiple genome alignment in the telomere-to-telomere assembly era

端粒到端粒组装时代的多重基因组比对

Kille, Bryce; Balaji, Advait; Sedlazeck, Fritz J; Nute, Michael; Treangen, Todd J