日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Quantitative modulation of a spatial enhancer through the biophysical properties of a transcription factor binding site

通过转录因子结合位点的生物物理特性对空间增强子进行定量调控

Fallon, Conrad; Ling, Liucong; Cooper, Brendon H; Ceolin, Stefano; Chiu, Tsu-Pei; Mitra, Raktim; Mühling, Bettina; Srinivasan, Vani; Durmaz, Ayse Damla; Veselinovic, Daniel; Kothari, Mahek; Fylaktakis, Athanasios Panagiotis; Glassford, William J; Kribelbauer-Swietek, Judith F; Papadopoulos, Dimitrios K; Mann, Richard S; Rohs, Remo; Gompel, Nicolas

Low Silicon and Better Pasture Feeding Quality: Uncovering Genetic Diversity in Russian Wildrye (Psathyrostachys juncea)

低硅含量与更佳牧草饲用质量:揭示俄罗斯野生黑麦(Psathyrostachys juncea)的遗传多样性

Jiang, Yibei; Shewchuk, Alexandra M; Chiu, Tsu-Pei; Li, Jinsen; Kribelbauer-Swietek, Judith F; Gompel, Nicolas; Rohs, Remo; Chotphruethipong, Lalita; Benjakul, Soottawat; Aluko, Rotimi E; Senphan, Theeraphol; Hutamekalin, Pilaiwanwadee; Sinthusamran, Sirima; Takayama, Tetsuo; Shimizu, Daisuke; Zhong, Weishen; Yue, Kai; Zhang, Genpei; Hu, Ziyang; Papagiouvannis, Georgios; Theodosis-Nobelos, Panagiotis; Rekka, Eleni A; Hou, Zhanfeng; Hou, Yahe; Chen, Qi; Yang, Hui; Wang, Hongzhen; Xin, Zhenxiang; Karataş, Mukaddes; Erzen, Buket; Deniz, Şermin; Aydoğmuş, Ercan; Orhan, Ramazan; Xiong, Dongwei; Sun, Huiying; Sun, Yuhang; Li, Peng; Long, Miao; Shang, Ben; Fu, Wenjie; Yang, Lei; Yang, Qifan; Yuan, Zian; Wang, Zijiang; Fan, Youping; Tsigkaropoulou, Evdoxia; Gonidakis, Fragiskos; Michopoulos, Ioannis; Strużyńska, Lidia; Adamiak, Kamil; Sidoryk-Węgrzynowicz, Marta; Ede İleri, Gözde; Serin, Yeliz; Akın, Pelin; Ataş, Yusuf; Çınar, Sude; Alshorman, Ahmad M; Al-zu’bi, Bashar Sh; Ababneh, Omar A; Al Manasra, Abdel Rahman; Alshurman, Khaled; Alhmoud, Tarik; Xhafa, Sonila; Pietracci, Lorenzo; Giacomantonio, Roberto; Marchetti, Fabio; Castorani, Vincenzo; Antonini, Marco; Gunnella, Roberto; Mattiello, Sara; Fragassa, Cristiano; Santulli, Carlo; Irkeç, Zeynep; Şentürk, Ayben; Orhan, Kaan; Dashkevich, Svetlana; Utebayev, Maral; Filippova, Nadezhda; Kradetskaya, Oksana; Chilimova, Irina; Rukavitsina, Irina; Khassanova, Gulmira; Jatayev, Satyvaldy; Shavrukov, Yuri

Multiscale regulation of nutrient stress responses in Escherichia coli from chromatin structure to small regulatory RNAs

大肠杆菌营养胁迫反应的多尺度调控:从染色质结构到小型调控RNA

Ekdahl, Alyssa M; Julien, Tatiana; Suraj, Sahana; Kribelbauer-Swietek, Judith F; Tavazoie, Saeed; Freddolino, Lydia; Contreras, Lydia M

Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台基序发现和基准测试,以探索研究较少的人类转录因子的结合特异性

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

Context transcription factors establish cooperative environments and mediate enhancer communication

背景转录因子建立协同环境并介导增强子通讯。

Kribelbauer-Swietek, Judith F; Pushkarev, Olga; Gardeux, Vincent; Faltejskova, Katerina; Russeil, Julie; van Mierlo, Guido; Deplancke, Bart

Non-coding variants impact cis-regulatory coordination in a cell type-specific manner

非编码变异以细胞类型特异性的方式影响顺式调控协调。

Pushkarev, Olga; van Mierlo, Guido; Kribelbauer, Judith Franziska; Saelens, Wouter; Gardeux, Vincent; Deplancke, Bart

Perspectives on Codebook: sequence specificity of uncharacterized human transcription factors

Codebook 的观点:未知人类转录因子的序列特异性

Arttu Jolma, Kaitlin U Laverty, Ali Fathi, Ally W H Yang, Isaac Yellan, Ilya E Vorontsov, Sachi Inukai, Judith F Kribelbauer-Swietek, Antoni J Gralak, Rozita Razavi, Mihai Albu, Alexander Brechalov, Zain M Patel, Vladimir Nozdrin, Georgy Meshcheryakov, Ivan Kozin, Sergey Abramov, Alexandr Boytsov; C

Identification of methylation-sensitive human transcription factors using meSMiLE-seq

利用meSMiLE-seq鉴定甲基化敏感的人类转录因子

Gralak, Antoni J; Faltejskova, Katerina; Yang, Ally W H; Steiner, Clemence; Russeil, Julie; Grenningloh, Nadia; Inukai, Sachi; Demir, Mustafa; Dainese, Riccardo; Owen, Cooper; Pankevich, Eugenia; Hughes, Timothy R; Kulakovskiy, Ivan V; Kribelbauer-Swietek, Judith F; van Mierlo, Guido; Deplancke, Bart

Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台DNA基序发现和基准测试,以探索研究较少的人类转录因子的结合特异性

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

Prediction of protein-ligand binding affinity from sequencing data with interpretable machine learning

使用可解释的机器学习从测序数据预测蛋白质-配体结合亲和力

H Tomas Rube, Chaitanya Rastogi, Siqian Feng #, Judith F Kribelbauer #, Allyson Li #, Basheer Becerra, Lucas A N Melo, Bach Viet Do, Xiaoting Li, Hammaad H Adam, Neel H Shah, Richard S Mann, Harmen J Bussemaker