Liang Shoudan相关文献与解析，生知库 | 链接生命科学的每一步

Ghoreyshi, Zahra S; Tubo, Noah; Zammataro, Luca; Mao, Xizeng; Ngai, Ho; Wang, Duncheng; Chen, Yibin; He, Qiuming; Cisneros, Eduardo; Liang, Shoudan; Koppikar, Priya J; Lin, Xingcheng; Molldrem, Jeffrey J; George, Jason T

肿瘤

T细胞

肿瘤免疫

Local sequence and sequencing depth dependent accuracy of RNA-seq reads

RNA-seq 读取的局部序列和测序深度依赖性准确性

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/s12859-017-1780-z

Cai, Guoshuai; Liang, Shoudan; Zheng, Xiaofeng; Xiao, Feifei

发表日期：2017

文献求助收藏

SOX9 regulates multiple genes in chondrocytes, including genes encoding ECM proteins, ECM modification enzymes, receptors, and transporters

SOX9调控软骨细胞中的多个基因，包括编码细胞外基质蛋白、细胞外基质修饰酶、受体和转运蛋白的基因。

期刊:PLoS One

影响因子:2.6

doi:10.1371/journal.pone.0107577

Oh, Chun-do; Lu, Yue; Liang, Shoudan; Mori-Akiyama, Yuko; Chen, Di; de Crombrugghe, Benoit; Yasuda, Hideyo

A role for BMP-induced homeobox gene MIXL1 in acute myelogenous leukemia and identification of type I BMP receptor as a potential target for therapy

BMP诱导的同源盒基因MIXL1在急性髓系白血病中的作用以及I型BMP受体作为潜在治疗靶点的鉴定

期刊:Oncotarget

影响因子:

doi:10.18632/oncotarget.2564

Raymond, Aaron; Liu, Bin; Liang, Hong; Wei, Caimiao; Guindani, Michele; Lu, Yue; Liang, Shoudan; St John, Lisa S; Molldrem, Jeff; Nagarajan, Lalitha

Access to the nucleus and functional association with c-Myc is required for the full oncogenic potential of ΔEGFR/EGFRvIII

ΔEGFR/EGFRvIII 完全发挥致癌潜能需要进入细胞核并与 c-Myc 发生功能性结合。

期刊:Journal of Biological Chemistry

影响因子:3.9

doi:10.1074/jbc.M112.399352

Gururaj, Anupama E; Gibson, Laura; Panchabhai, Sonali; Bai, MingHui; Manyam, Ganiraju; Lu, Yue; Latha, Khatri; Rojas, Marta L; Hwang, Yeohyeon; Liang, Shoudan; Bogler, Oliver

The postnatal role of Sox9 in cartilage

Sox9在软骨中的出生后作用

期刊:Journal of Bone and Mineral Research

影响因子:5.9

doi:10.1002/jbmr.1696

Henry, Stephen P; Liang, Shoudan; Akdemir, Kadir C; de Crombrugghe, Benoit

发表日期：2012

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Accuracy of RNA-Seq and its dependence on sequencing depth

RNA-Seq的准确性及其对测序深度的依赖性

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/1471-2105-13-S13-S5

Cai, Guoshuai; Li, Hua; Lu, Yue; Huang, Xuelin; Lee, Juhee; Müller, Peter; Ji, Yuan; Liang, Shoudan

发表日期：2012

文献求助收藏

BM-BC: a Bayesian method of base calling for Solexa sequence data

BM-BC：一种用于Solexa序列数据的贝叶斯碱基识别方法

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/1471-2105-13-S13-S6

Ji, Yuan; Mitra, Riten; Quintana, Fernando; Jara, Alejandro; Mueller, Peter; Liu, Ping; Lu, Yue; Liang, Shoudan

发表日期：2012

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dsPIG: a tool to predict imprinted genes from the deep sequencing of whole transcriptomes

dsPIG：一种利用全转录组深度测序预测印记基因的工具

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/1471-2105-13-271

Li, Hua; Su, Xiao; Gallegos, Juan; Lu, Yue; Ji, Yuan; Molldrem, Jeffrey J; Liang, Shoudan

表观遗传

发表日期：2012

文献求助收藏

Conserved DNA methylation patterns in healthy blood cells and extensive changes in leukemia measured by a new quantitative technique

利用一种新的定量技术测量发现，健康血细胞中保守的DNA甲基化模式与白血病中广泛的改变有关。

期刊:Epigenetics

影响因子:3.2

doi:10.4161/epi.22552

Jelinek, Jaroslav; Liang, Shoudan; Lu, Yue; He, Rong; Ramagli, Louis S; Shpall, Elizabeth J; Estecio, Marcos R H; Issa, Jean-Pierre J

Biophysical modeling for accurate T cell specificity prediction of viral and tumor antigens

利用生物物理模型准确预测病毒和肿瘤抗原的T细胞特异性

Local sequence and sequencing depth dependent accuracy of RNA-seq reads

RNA-seq 读取的局部序列和测序深度依赖性准确性

SOX9 regulates multiple genes in chondrocytes, including genes encoding ECM proteins, ECM modification enzymes, receptors, and transporters

SOX9调控软骨细胞中的多个基因，包括编码细胞外基质蛋白、细胞外基质修饰酶、受体和转运蛋白的基因。

A role for BMP-induced homeobox gene MIXL1 in acute myelogenous leukemia and identification of type I BMP receptor as a potential target for therapy

BMP诱导的同源盒基因MIXL1在急性髓系白血病中的作用以及I型BMP受体作为潜在治疗靶点的鉴定

Access to the nucleus and functional association with c-Myc is required for the full oncogenic potential of ΔEGFR/EGFRvIII

ΔEGFR/EGFRvIII 完全发挥致癌潜能需要进入细胞核并与 c-Myc 发生功能性结合。

The postnatal role of Sox9 in cartilage

Sox9在软骨中的出生后作用

Accuracy of RNA-Seq and its dependence on sequencing depth

RNA-Seq的准确性及其对测序深度的依赖性

BM-BC: a Bayesian method of base calling for Solexa sequence data

BM-BC：一种用于Solexa序列数据的贝叶斯碱基识别方法

dsPIG: a tool to predict imprinted genes from the deep sequencing of whole transcriptomes

dsPIG：一种利用全转录组深度测序预测印记基因的工具

Conserved DNA methylation patterns in healthy blood cells and extensive changes in leukemia measured by a new quantitative technique

利用一种新的定量技术测量发现，健康血细胞中保守的DNA甲基化模式与白血病中广泛的改变有关。