日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Evaluation of the Ultima Genomics UG 100 sequencer for low-cost, high-sensitivity metagenomic pathogen detection from cerebrospinal fluid

评估 Ultima Genomics UG 100 测序仪在脑脊液中低成本、高灵敏度宏基因组病原体检测方面的应用

Shean, Ryan C; Tardif, Keith D; Rangel, Alexandra; Dutrschi, Jacob; Bogumil, David; Cruse, Alix; Hernandez, Samm; Iremadze, Nika; Pollock, Sarah; Lipson, Doron; Bradley, Benjamin T

Individual variations in glycemic responses to carbohydrates and underlying metabolic physiology

个体对碳水化合物的血糖反应差异及其潜在的代谢生理机制

Wu, Yue; Ehlert, Ben; Metwally, Ahmed A; Perelman, Dalia; Park, Heyjun; Brooks, Andrew Wallace; Abbasi, Fahim; Michael, Basil; Celli, Alessandra; Bejikian, Caroline; Ayhan, Ekrem; Lu, Yingzhou; Lancaster, Samuel M; Hornburg, Daniel; Ramirez, Lucia; Bogumil, David; Pollock, Sarah; Wong, Frank; Bradley, Denver; Gutjahr, Georg; Rangan, Ekanath Srihari; Wang, Tao; McGuire, Lettie; Venkat Rangan, P; Ræder, Helge; Shipony, Zohar; Lipson, Doron; McLaughlin, Tracey; Snyder, Michael P

Error-corrected flow-based sequencing at whole-genome scale and its application to circulating cell-free DNA profiling

全基因组规模的纠错流式测序及其在循环游离DNA分析中的应用

Cheng, Alexandre Pellan; Widman, Adam J; Arora, Anushri; Rusinek, Itai; Sossin, Aaron; Rajagopalan, Srinivas; Midler, Nicholas; Hooper, William F; Murray, Rebecca M; Halmos, Daniel; Langanay, Theophile; Chu, Hoyin; Inghirami, Giorgio; Potenski, Catherine; Germer, Soren; Marton, Melissa; Manaa, Dina; Helland, Adrienne; Furatero, Rob; McClintock, Jaime; Winterkorn, Lara; Steinsnyder, Zoe; Wang, Yohyoh; Alimohamed, Asrar I; Malbari, Murtaza S; Saxena, Ashish; Callahan, Margaret K; Frederick, Dennie T; Spain, Lavinia; Sigouros, Michael; Manohar, Jyothi; King, Abigail; Wilkes, David; Otilano, John; Elemento, Olivier; Mosquera, Juan Miguel; Jaimovich, Ariel; Lipson, Doron; Turajlic, Samra; Zody, Michael C; Altorki, Nasser K; Wolchok, Jedd D; Postow, Michael A; Robine, Nicolas; Faltas, Bishoy M; Boland, Genevieve; Landau, Dan A

Author Correction: Global loss of promoter-enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis

作者更正:早期结直肠癌发生过程中启动子-增强子连接的整体丧失和基因表达的重新平衡

Zhu, Yizhou; Lee, Hayan; White, Shannon; Weimer, Annika K; Monte, Emma; Horning, Aaron; Nevins, Stephanie A; Esplin, Edward D; Paul, Kristina; Krieger, Gat; Shipony, Zohar; Chiu, Roxanne; Laquindanum, Rozelle; Karathanos, Thomas V; Chua, Melissa W Y; Mills, Meredith; Ladabaum, Uri; Longacre, Teri; Shen, Jeanne; Jaimovich, Ariel; Lipson, Doron; Kundaje, Anshul; Greenleaf, William J; Curtis, Christina; Ford, James M; Snyder, Michael P

Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens

利用可扩展的单细胞扰动筛选系统地重建分子通路特征

Jiang, Longda; Dalgarno, Carol; Papalexi, Efthymia; Mascio, Isabella; Wessels, Hans-Hermann; Yun, Huiyoung; Iremadze, Nika; Lithwick-Yanai, Gila; Lipson, Doron; Satija, Rahul

Correction: Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

更正:开发并广泛测序了经广泛认可的“瓶中基因组”匹配的肿瘤-正常样本对

McDaniel, Jennifer H; Patel, Vaidehi; Olson, Nathan D; He, Hua-Jun; He, Zhiyong; Cole, Kenneth D; Gooden, Alexander A; Schmitt, Anthony; Sikkink, Kristin; Sedlazeck, Fritz J; Doddapaneni, Harsha; Jhangiani, Shalini N; Muzny, Donna M; Gingras, Marie-Claude; Mehta, Heer; Behera, Sairam; Paulin, Luis F; Hastie, Alex R; Yu, Hung-Chun; Weigman, Victor; Rojas, Alison; Kennedy, Katie; Remington, Jamie; Salas-González, Isai; Sudkamp, Mitch; Wiseman, Kelly; Lajoie, Bryan R; Levy, Shawn; Jain, Miten; Akeson, Stuart; Narzisi, Giuseppe; Steinsnyder, Zoe; Reeves, Catherine; Shelton, Jennifer; Kingan, Sarah B; Lambert, Christine; Baybayan, Primo; Wenger, Aaron M; McLaughlin, Ian J; Adamson, Aaron; Kingsley, Christopher; Wescott, Melanie; Kim, Young; Paten, Benedict; Park, Jimin; Violich, Ivo; Miga, Karen H; Gardner, Joshua; McNulty, Brandy; Rosen, Gail L; McCoy, Rajiv; Brundu, Francesco; Sayyari, Erfan; Scheffler, Konrad; Truong, Sean; Catreux, Severine; Hannah, Lesley Chapman; Lipson, Doron; Benjamin, Hila; Iremadze, Nika; Soifer, Ilya; Krieger, Gat; Eacker, Stephen; Wood, Mary; Cross, Erin; Husar, Greg; Gross, Stephen; Vernich, Michael; Kolmogorov, Mikhail; Ahmad, Tanveer; Keskus, Ayse G; Bryant, Asher; Thibaud-Nissen, Francoise; Trow, Jonathan; Proszynski, Jacqueline; Hirschberg, Jeremy Wain; Ryon, Krista; Mason, Christopher E; Bhakta, Mital S; Sanborn, J Zachary; Munding, Elizabeth M; Wagner, Justin; Xiao, Chunlin; Liss, Andrew S; Zook, Justin M

An automated ATAC-seq method reveals sequence determinants of transcription factor dose response in the open chromatin

一种自动化的ATAC-seq方法揭示了开放染色质中转录因子剂量反应的序列决定因素

Liu, Betty B; Shimasawa, Masaru; Vermeulen, Sidney; Kim, Samuel H; Iremadze, Nika; Lipson, Doron; Shipony, Zohar; Greenleaf, William J

Global loss of promoter-enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis.

结直肠癌早期癌变过程中启动子-增强子连接的整体丧失和基因表达的重新平衡

Zhu Yizhou, Lee Hayan, White Shannon, Weimer Annika K, Monte Emma, Horning Aaron, Nevins Stephanie A, Esplin Edward D, Paul Kristina, Krieger Gat, Shipony Zohar, Chiu Roxanne, Laquindanum Rozelle, Karathanos Thomas V, Chua Melissa W Y, Mills Meredith, Ladabaum Uri, Longacre Teri, Shen Jeanne, Jaimovich Ariel, Lipson Doron, Kundaje Anshul, Greenleaf William J, Curtis Christina, Ford James M, Snyder Michael P

A longitudinal circulating tumor DNA-based model associated with survival in metastatic non-small-cell lung cancer

一种基于循环肿瘤DNA的纵向模型与转移性非小细胞肺癌的生存率相关

Assaf, Zoe June F; Zou, Wei; Fine, Alexander D; Socinski, Mark A; Young, Amanda; Lipson, Doron; Freidin, Jonathan F; Kennedy, Mark; Polisecki, Eliana; Nishio, Makoto; Fabrizio, David; Oxnard, Geoffrey R; Cummings, Craig; Rode, Anja; Reck, Martin; Patil, Namrata S; Lee, Mark; Shames, David S; Schulze, Katja

Hybrid Capture-Based Comprehensive Genomic Profiling Identifies Lung Cancer Patients with Well-Characterized Sensitizing Epidermal Growth Factor Receptor Point Mutations That Were Not Detected by Standard of Care Testing

基于杂交捕获的全面基因组分析可识别出具有特征明确的表皮生长因子受体(EGFR)致敏点突变的肺癌患者,而这些突变无法通过标准检测方法检测到。

Suh, James H; Schrock, Alexa B; Johnson, Adrienne; Lipson, Doron; Gay, Laurie M; Ramkissoon, Shakti; Vergilio, Jo-Anne; Elvin, Julia A; Shakir, Abdur; Ruehlman, Peter; Reckamp, Karen L; Ou, Sai-Hong Ignatius; Ross, Jeffrey S; Stephens, Philip J; Miller, Vincent A; Ali, Siraj M