日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Toward Computationally Complete Spatial Omics

迈向计算完整的空间组学

Li, Wei; Mao, Liran; Liu, Yunhe; Peng, Fuduan; Sachs, Nadja; Wu, Wenrui; Yiu, Stephanie Pei Tung; Yan, Hanying; Schroeder, Amelia; Yu, Xiaokang; Jin, Kaitian; Jiang, Shunzhou; Chen, Zihao; Loth, Melanie L; Gomez, Lorena; Lubo, Idania; Blank, Niklas; Samarah, Laith Z; Basak, Ankit; Cho, Ye Won; Chen, Chia-Yu; Kim, David M; Shalek, Alex K; Soto, Luisa Maren Solis; Rabinowitz, Joshua D; Reilly, Muredach P; Qian, Xuyu; Thaiss, Christoph A; Maegdefessel, Lars; Wang, Linghua; Kadara, Humam; Jiang, Sizun; Deng, Yanxiang; Li, Mingyao

Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE

利用 iSCALE 将空间转录组学扩展到大尺寸组织:揭示超越传统平台的细胞级组织结构

Schroeder, Amelia; Loth, Melanie L; Luo, Chunyu; Yao, Sicong; Yan, Hanying; Zhang, Daiwei; Piya, Sarbottam; Plowey, Edward; Hu, Wenxing; Clemenceau, Jean R; Jang, Inyeop; Kim, Minji; Barnfather, Isabel; Chan, Su Jing; Reynolds, Taylor L; Carlile, Thomas; Cullen, Patrick; Sung, Ji-Youn; Tsai, Hui-Hsin; Park, Jeong Hwan; Hwang, Tae Hyun; Zhang, Baohong; Li, Mingyao

Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE.

利用 iSCALE 将空间转录组学扩展到大组织:揭示超越传统平台的细胞级组织结构

Schroeder Amelia, Loth Melanie, Luo Chunyu, Yao Sicong, Yan Hanying, Zhang Daiwei, Piya Sarbottam, Plowey Edward, Hu Wenxing, Clemenceau Jean R, Jang Inyeop, Kim Minji, Barnfather Isabel, Chan Su Jing, Reynolds Taylor L, Carlile Thomas, Cullen Patrick, Sung Ji-Youn, Tsai Hui-Hsin, Park Jeong Hwan, Hwang Tae Hyun, Zhang Baohong, Li Mingyao

Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS

利用CoGAPS的Python、R和GenePattern Notebook实现,通过非负矩阵分解推断单细胞数据中的细胞和分子过程。

Johnson, Jeanette A I; Tsang, Ashley P; Mitchell, Jacob T; Zhou, David L; Bowden, Julia; Davis-Marcisak, Emily; Sherman, Thomas; Liefeld, Ted; Loth, Melanie; Goff, Loyal A; Zimmerman, Jacquelyn W; Kinny-Köster, Ben; Jaffee, Elizabeth M; Tamayo, Pablo; Mesirov, Jill P; Reich, Michael; Fertig, Elana J; Stein-O'Brien, Genevieve L

Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces

通过潜在空间揭示肿瘤微环境中分子相互作用的空间格局

Deshpande, Atul; Loth, Melanie; Sidiropoulos, Dimitrios N; Zhang, Shuming; Yuan, Long; Bell, Alexander T F; Zhu, Qingfeng; Ho, Won Jin; Santa-Maria, Cesar; Gilkes, Daniele M; Williams, Stephen R; Uytingco, Cedric R; Chew, Jennifer; Hartnett, Andrej; Bent, Zachary W; Favorov, Alexander V; Popel, Aleksander S; Yarchoan, Mark; Kiemen, Ashley; Wu, Pei-Hsun; Fujikura, Kohei; Wirtz, Denis; Wood, Laura D; Zheng, Lei; Jaffee, Elizabeth M; Anders, Robert A; Danilova, Ludmila; Stein-O'Brien, Genevieve; Kagohara, Luciane T; Fertig, Elana J

Author Correction: Community-wide hackathons to identify central themes in single-cell multi-omics

作者更正:举办全社区黑客马拉松以确定单细胞多组学中的核心主题

Cao, Kim-Anh Lê; Abadi, Al J; Davis-Marcisak, Emily F; Hsu, Lauren; Arora, Arshi; Coullomb, Alexis; Deshpande, Atul; Feng, Yuzhou; Jeganathan, Pratheepa; Loth, Melanie; Meng, Chen; Mu, Wancen; Pancaldi, Vera; Sankaran, Kris; Righelli, Dario; Singh, Amrit; Sodicoff, Joshua S; Stein-O'Brien, Genevieve L; Subramanian, Ayshwarya; Welch, Joshua D; You, Yue; Argelaguet, Ricard; Carey, Vincent J; Dries, Ruben; Greene, Casey S; Holmes, Susan; Love, Michael I; Ritchie, Matthew E; Yuan, Guo-Cheng; Culhane, Aedin C; Fertig, Elana

Community-wide hackathons to identify central themes in single-cell multi-omics

举办全社区黑客马拉松,以确定单细胞多组学的核心主题

Lê Cao, Kim-Anh; Abadi, Al J; Davis-Marcisak, Emily F; Hsu, Lauren; Arora, Arshi; Coullomb, Alexis; Deshpande, Atul; Feng, Yuzhou; Jeganathan, Pratheepa; Loth, Melanie; Meng, Chen; Mu, Wancen; Pancaldi, Vera; Sankaran, Kris; Righelli, Dario; Singh, Amrit; Sodicoff, Joshua S; Stein-O'Brien, Genevieve L; Subramanian, Ayshwarya; Welch, Joshua D; You, Yue; Argelaguet, Ricard; Carey, Vincent J; Dries, Ruben; Greene, Casey S; Holmes, Susan; Love, Michael I; Ritchie, Matthew E; Yuan, Guo-Cheng; Culhane, Aedin C; Fertig, Elana