日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

Severus 利用长读长测序技术检测癌症基因组中的体细胞结构变异和复杂重排。

Keskus, Ayse G; Bryant, Asher; Ahmad, Tanveer; Yoo, Byunggil; Aganezov, Sergey; Goretsky, Anton; Donmez, Ataberk; Lansdon, Lisa A; Rodriguez, Isabel; Park, Jimin; Liu, Yuelin; Cui, Xiwen; Gardner, Joshua; McNulty, Brandy; Sacco, Samuel; Shetty, Jyoti; Zhao, Yongmei; Tran, Bao; Narzisi, Giuseppe; Helland, Adrienne; Cook, Daniel E; Chang, Pi-Chuan; Kolesnikov, Alexey; Carroll, Andrew; Molloy, Erin K; Bi, Chengpeng; Walter, Adam; Gibson, Margaret; Pushel, Irina; Guest, Erin; Pastinen, Tomi; Shafin, Kishwar; Miga, Karen H; Malikic, Salem; Day, Chi-Ping; Robine, Nicolas; Sahinalp, Cenk; Dean, Michael; Farooqi, Midhat S; Paten, Benedict; Kolmogorov, Mikhail

GenCore: Genomic distance estimation using Locally Consistent Parsing

GenCore:基于局部一致性解析的基因组距离估计

Ashyralyyev, Akmuhammet; Sirvan, Ege; İlgün, Ecem; Malikic, Salem; Batu, Tuğkan; Sahinalp, S Cenk; Alkan, Can

Stochastic modeling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones

单细胞基因表达适应的随机建模揭示了非基因组因素对肿瘤亚克隆进化的贡献

Hirsch, M G; Pal, Soumitra; Rashidi Mehrabadi, Farid; Malikic, Salem; Gruen, Charli; Sassano, Antonella; Pérez-Guijarro, Eva; Merlino, Glenn; Sahinalp, S Cenk; Molloy, Erin K; Day, Chi-Ping; Przytycka, Teresa M

Stochastic modelling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones

单细胞基因表达适应的随机建模揭示了非基因组因素对肿瘤亚克隆进化的贡献

Hirsch, M G; Pal, Soumitra; Mehrabadi, Farid Rashidi; Malikic, Salem; Gruen, Charli; Sassano, Antonella; Pérez-Guijarro, Eva; Merlino, Glenn; Sahinalp, Cenk; Molloy, Erin K; Day, Chi-Ping; Przytycka, Teresa M

Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads.

Severus:利用长读长技术准确检测和表征肿瘤基因组中的体细胞结构变异。

Keskus Ayse, Bryant Asher, Ahmad Tanveer, Yoo Byunggil, Aganezov Sergey, Goretsky Anton, Donmez Ataberk, Lansdon Lisa A, Rodriguez Isabel, Park Jimin, Liu Yuelin, Cui Xiwen, Gardner Joshua, McNulty Brandy, Sacco Samuel, Shetty Jyoti, Zhao Yongmei, Tran Bao, Narzisi Giuseppe, Helland Adrienne, Cook Daniel E, Chang Pi-Chuan, Kolesnikov Alexey, Carroll Andrew, Molloy Erin K, Pushel Irina, Guest Erin, Pastinen Tomi, Shafin Kishwar, Miga Karen H, Malikic Salem, Day Chi-Ping, Robine Nicolas, Sahinalp Cenk, Dean Michael, Farooqi Midhat S, Paten Benedict, Kolmogorov Mikhail

Author Correction: The evolutionary history of 2,658 cancers

作者更正:2658种癌症的演化史

Gerstung, Moritz; Jolly, Clemency; Leshchiner, Ignaty; Dentro, Stefan C; Gonzalez, Santiago; Rosebrock, Daniel; Mitchell, Thomas J; Rubanova, Yulia; Anur, Pavana; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Wintersinger, Jeff; Kleinheinz, Kortine; Vázquez-García, Ignacio; Haase, Kerstin; Jerman, Lara; Sengupta, Subhajit; Macintyre, Geoff; Malikic, Salem; Donmez, Nilgun; Livitz, Dimitri G; Cmero, Marek; Demeulemeester, Jonas; Schumacher, Steven; Fan, Yu; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Boutros, Paul C; Bowtell, David D; Zhu, Hongtu; Getz, Gad; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, S Cenk; Ji, Yuan; Peifer, Martin; Markowetz, Florian; Mustonen, Ville; Yuan, Ke; Wang, Wenyi; Morris, Quaid D; Spellman, Paul T; Wedge, David C; Van Loo, Peter

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

对2658个人类癌症基因组的肿瘤内遗传异质性进行表征

Dentro, Stefan C; Leshchiner, Ignaty; Haase, Kerstin; Tarabichi, Maxime; Wintersinger, Jeff; Deshwar, Amit G; Yu, Kaixian; Rubanova, Yulia; Macintyre, Geoff; Demeulemeester, Jonas; Vázquez-García, Ignacio; Kleinheinz, Kortine; Livitz, Dimitri G; Malikic, Salem; Donmez, Nilgun; Sengupta, Subhajit; Anur, Pavana; Jolly, Clemency; Cmero, Marek; Rosebrock, Daniel; Schumacher, Steven E; Fan, Yu; Fittall, Matthew; Drews, Ruben M; Yao, Xiaotong; Watkins, Thomas B K; Lee, Juhee; Schlesner, Matthias; Zhu, Hongtu; Adams, David J; McGranahan, Nicholas; Swanton, Charles; Getz, Gad; Boutros, Paul C; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, S Cenk; Ji, Yuan; Peifer, Martin; Martincorena, Inigo; Markowetz, Florian; Mustonen, Ville; Yuan, Ke; Gerstung, Moritz; Spellman, Paul T; Wang, Wenyi; Morris, Quaid D; Wedge, David C; Van Loo, Peter

The evolutionary history of 2,658 cancers

2658种癌症的演变史

Gerstung, Moritz; Jolly, Clemency; Leshchiner, Ignaty; Dentro, Stefan C; Gonzalez, Santiago; Rosebrock, Daniel; Mitchell, Thomas J; Rubanova, Yulia; Anur, Pavana; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Wintersinger, Jeff; Kleinheinz, Kortine; Vázquez-García, Ignacio; Haase, Kerstin; Jerman, Lara; Sengupta, Subhajit; Macintyre, Geoff; Malikic, Salem; Donmez, Nilgun; Livitz, Dimitri G; Cmero, Marek; Demeulemeester, Jonas; Schumacher, Steven; Fan, Yu; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Boutros, Paul C; Bowtell, David D; Zhu, Hongtu; Getz, Gad; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, S Cenk; Ji, Yuan; Peifer, Martin; Markowetz, Florian; Mustonen, Ville; Yuan, Ke; Wang, Wenyi; Morris, Quaid D; Spellman, Paul T; Wedge, David C; Van Loo, Peter