日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Exploration of Cryptic Pockets Using Enhanced Sampling Along Normal Modes: A Case Study of KRAS (G12D)

利用沿简正模式的增强采样探索隐秘口袋:KRAS (G12D) 案例研究

Vithani, Neha; Zhang, She; Thompson, Jeffrey P; Patel, Lara A; Demidov, Alex; Xia, Junchao; Balaeff, Alexander; Mentes, Ahmet; Arnautova, Yelena A; Kohlmann, Anna; Lawson, J David; Nicholls, Anthony; Skillman, A Geoffrey; LeBard, David N

Computational and Functional Analyses of HER2 Mutations Reveal Allosteric Activation Mechanisms and Altered Pharmacologic Effects.

HER2 突变的计算和功能分析揭示了变构激活机制和改变的药理效应

Ishiyama Noboru, O'Connor Matthew, Salomatov Andrei, Romashko Darlene, Thakur Shalabh, Mentes Ahmet, Hopkins Julia F, Frampton Garrett M, Albacker Lee A, Kohlmann Anna, Roberts Christopher, Buck Elizabeth

High-resolution cryo-EM structures of actin-bound myosin states reveal the mechanism of myosin force sensing

肌动蛋白结合肌球蛋白状态的高分辨率冷冻电镜结构揭示了肌球蛋白力感应机制。

Mentes, Ahmet; Huehn, Andrew; Liu, Xueqi; Zwolak, Adam; Dominguez, Roberto; Shuman, Henry; Ostap, E Michael; Sindelar, Charles V

Binding Energy Distribution Analysis Method: Hamiltonian Replica Exchange with Torsional Flattening for Binding Mode Prediction and Binding Free Energy Estimation

结合能分布分析方法:基于扭转展平的哈密顿量副本交换结合模式预测和结合自由能估计

Mentes, Ahmet; Deng, Nan-Jie; Vijayan, R S K; Xia, Junchao; Gallicchio, Emilio; Levy, Ronald M

Large scale free energy calculations for blind predictions of protein-ligand binding: the D3R Grand Challenge 2015

用于盲预测蛋白质-配体结合的大规模自由能计算:D3R 2015 年大挑战

Deng, Nanjie; Flynn, William F; Xia, Junchao; Vijayan, R S K; Zhang, Baofeng; He, Peng; Mentes, Ahmet; Gallicchio, Emilio; Levy, Ronald M

Free-energy landscape and characteristic forces for the initiation of DNA unzipping

DNA解链起始的自由能景观和特征力

Mentes, Ahmet; Florescu, Ana Maria; Brunk, Elizabeth; Wereszczynski, Jeff; Joyeux, Marc; Andricioaei, Ioan

Asynchronous Replica Exchange Software for Grid and Heterogeneous Computing

面向网格和异构计算的异步副本交换软件

Gallicchio, Emilio; Xia, Junchao; Flynn, William F; Zhang, Baofeng; Samlalsingh, Sade; Mentes, Ahmet; Levy, Ronald M