日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Evolution of oncogene amplification across 86,000 cancer cell genomes

86000个癌细胞基因组中癌基因扩增的演变

Lee, Jake June-Koo; Salehi, Sohrab; Myers, Matthew A; Williams, Marc J; Yao, Melissa A; Al-Rawi, Duaa H; Lee, Jin; Sun, Eric G; Thol, Kerstin; Choi, Seongmin; Havasov, Eliyahu; Steinberg, Asher Preska; Wu, Michelle; Rusk, Nicole; Timmons, Caitlin; Phua, Cheryl Zi Jin; Martis, Stephen; Mohibullah, Neeman; Manoj, Parvathy; Redin, Esther; Quintanal-Villalonga, Álvaro; Razavi, Pedram; Aparicio, Samuel; Rekhtman, Natasha; Tabar, Viviane; Awad, Mark M; Yu, Helena A; Yu, Kenny Kwok Hei; Ventura, Andrea; McPherson, Andrew; Rudin, Charles M; Shah, Sohrab P

Tracking clonal evolution during treatment in ovarian cancer using cell-free DNA

利用游离DNA追踪卵巢癌治疗过程中的克隆演变

Williams, Marc J; Vázquez-García, Ignacio; Tam, Grittney; Wu, Michelle; Varice, Nancy; Havasov, Eliyahu; Shi, Hongyu; Al-Rawi, Duaa H; Satas, Gryte; Lees, Hannah J; Lee, Jake June-Koo; Myers, Matthew A; Zatzman, Matthew; Rusk, Nicole; Ali, Emily; Shah, Ronak H; Berger, Michael F; Mohibullah, Neeman; Lakhman, Yulia; Chi, Dennis S; Abu-Rustum, Nadeem R; Aghajanian, Carol; McPherson, Andrew; Zamarin, Dmitriy; Loomis, Brian; Weigelt, Britta; Friedman, Claire F; Shah, Sohrab P

Ongoing genome doubling shapes evolvability and immunity in ovarian cancer.

持续的基因组倍增塑造了卵巢癌的进化能力和免疫力

McPherson Andrew, Vázquez-García Ignacio, Myers Matthew A, Al-Rawi Duaa H, Zatzman Matthew, Weiner Adam C, Freeman Samuel, Mohibullah Neeman, Satas Gryte, Williams Marc J, Ceglia Nicholas, Norkūnaitė Danguolė, Zhang Allen W, Li Jun, Lim Jamie L P, Wu Michelle, Choi Seongmin, Havasov Eliyahu, Grewal Diljot, Shi Hongyu, Kim Minsoo, Schwarz Roland F, Kaufmann Tom, Dinh Khanh Ngoc, Uhlitz Florian, Tran Julie, Wu Yushi, Patel Ruchi, Ramakrishnan Satish, Kim DooA, Clarke Justin, Green Hunter, Ali Emily, DiBona Melody, Varice Nancy, Kundra Ritika, Broach Vance, Gardner Ginger J, Roche Kara Long, Sonoda Yukio, Zivanovic Oliver, Kim Sarah H, Grisham Rachel N, Liu Ying L, Viale Agnes, Rusk Nicole, Lakhman Yulia, Ellenson Lora H, Tavaré Simon, Aparicio Samuel, Chi Dennis S, Aghajanian Carol, Abu-Rustum Nadeem R, Friedman Claire F, Zamarin Dmitriy, Weigelt Britta, Bakhoum Samuel F, Shah Sohrab P

The Evolutionary Forest of Pancreatic Cancer

胰腺癌的进化森林

Mullen, Katelyn M; Hong, Jungeui; Attiyeh, Marc A; Hayashi, Akimasa; Sakamoto, Hitomi; Kohutek, Zachary A; McIntyre, Caitlin A; Zhang, Haochen; Makohon-Moore, Alvin P; Zucker, Amanda; Wood, Laura D; Myers, Matthew A; Arnold, Brian J; Zaccaria, Simone; Chou, Joanne F; Capanu, Marinela; Socci, Nicholas D; Raphael, Benjamin J; Iacobuzio-Donahue, Christine A

Inferring active mutational processes in cancer using single cell sequencing and evolutionary constraints

利用单细胞测序和进化约束推断癌症中的活跃突变过程

Satas, Gryte; Myers, Matthew A; McPherson, Andrew; Shah, Sohrab P

Single-cell chromatin accessibility reveals malignant regulatory programs in primary human cancers

单细胞染色质可及性揭示原发性人类癌症中的恶性调控程序

Sundaram, Laksshman; Kumar, Arvind; Zatzman, Matthew; Salcedo, Adriana; Ravindra, Neal; Shams, Shadi; Louie, Bryan H; Bagdatli, S Tansu; Myers, Matthew A; Sarmashghi, Shahab; Choi, Hyo Young; Choi, Won-Young; Yost, Kathryn E; Zhao, Yanding; Granja, Jeffrey M; Hinoue, Toshinori; Hayes, D Neil; Cherniack, Andrew; Felau, Ina; Choudhry, Hani; Zenklusen, Jean C; Farh, Kyle Kai-How; McPherson, Andrew; Curtis, Christina; Laird, Peter W; Demchok, John A; Yang, Liming; Tarnuzzer, Roy; Caesar-Johnson, Samantha J; Wang, Zhining; Doane, Ashley S; Khurana, Ekta; Castro, Mauro A A; Lazar, Alexander J; Broom, Bradley M; Weinstein, John N; Akbani, Rehan; Kumar, Shwetha V; Raphael, Benjamin J; Wong, Christopher K; Stuart, Joshua M; Safavi, Rojin; Benz, Christopher C; Johnson, Benjamin K; Kyi, Cindy; Shen, Hui; Corces, M Ryan; Chang, Howard Y; Greenleaf, William J

Ongoing genome doubling promotes evolvability and immune dysregulation in ovarian cancer

持续的基因组加倍促进卵巢癌的进化能力和免疫失调

McPherson, Andrew; Vázquez-García, Ignacio; Myers, Matthew A; Zatzman, Matthew; Al-Rawi, Duaa; Weiner, Adam; Freeman, Samuel; Mohibullah, Neeman; Satas, Gryte; Williams, Marc J; Ceglia, Nicholas; Zhang, Allen W; Li, Jun; Lim, Jamie L P; Wu, Michelle; Choi, Seongmin; Havasov, Eliyahu; Grewal, Diljot; Shi, Hongyu; Kim, Minsoo; Schwarz, Roland; Kaufmann, Tom; Dinh, Khanh Ngoc; Uhlitz, Florian; Tran, Julie; Wu, Yushi; Patel, Ruchi; Ramakrishnan, Satish; Kim, DooA; Clarke, Justin; Green, Hunter; Ali, Emily; DiBona, Melody; Varice, Nancy; Kundra, Ritika; Broach, Vance; Gardner, Ginger J; Roche, Kara Long; Sonoda, Yukio; Zivanovic, Oliver; Kim, Sarah H; Grisham, Rachel N; Liu, Ying L; Viale, Agnes; Rusk, Nicole; Lakhman, Yulia; Ellenson, Lora H; Tavaré, Simon; Aparicio, Samuel; Chi, Dennis S; Aghajanian, Carol; Abu-Rustum, Nadeem R; Friedman, Claire F; Zamarin, Dmitriy; Weigelt, Britta; Bakhoum, Samuel F; Shah, Sohrab P

Therapy-induced mutations drive the genomic landscape of relapsed acute lymphoblastic leukemia

治疗诱导的突变驱动复发性急性淋巴细胞白血病的基因组图谱。

Li, Benshang; Brady, Samuel W; Ma, Xiaotu; Shen, Shuhong; Zhang, Yingchi; Li, Yongjin; Szlachta, Karol; Dong, Li; Liu, Yu; Yang, Fan; Wang, Ningling; Flasch, Diane A; Myers, Matthew A; Mulder, Heather L; Ding, Lixia; Liu, Yanling; Tian, Liqing; Hagiwara, Kohei; Xu, Ke; Zhou, Xin; Sioson, Edgar; Wang, Tianyi; Yang, Liu; Zhao, Jie; Zhang, Hui; Shao, Ying; Sun, Hongye; Sun, Lele; Cai, Jiaoyang; Sun, Hui-Ying; Lin, Ting-Nien; Du, Lijuan; Li, Hui; Rusch, Michael; Edmonson, Michael N; Easton, John; Zhu, Xiaofan; Zhang, Jingliao; Cheng, Cheng; Raphael, Benjamin J; Tang, Jingyan; Downing, James R; Alexandrov, Ludmil B; Zhou, Bin-Bing S; Pui, Ching-Hon; Yang, Jun J; Zhang, Jinghui

Identifying tumor clones in sparse single-cell mutation data

在稀疏的单细胞突变数据中识别肿瘤克隆

Myers, Matthew A; Zaccaria, Simone; Raphael, Benjamin J

CALDER: Inferring Phylogenetic Trees from Longitudinal Tumor Samples

CALDER:从纵向肿瘤样本推断系统发育树

Myers, Matthew A; Satas, Gryte; Raphael, Benjamin J