日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Machine learning to attribute the source of Campylobacter infections in the United States: A retrospective analysis of national surveillance data

利用机器学习技术追溯美国弯曲杆菌感染的来源:一项基于国家监测数据的回顾性分析

Pascoe, Ben; Futcher, Georgina; Pensar, Johan; Bayliss, Sion C; Mourkas, Evangelos; Calland, Jessica K; Hitchings, Matthew D; Joseph, Lavin A; Lane, Charlotte G; Greenlee, Tiffany; Arning, Nicolas; Wilson, Daniel J; Jolley, Keith A; Corander, Jukka; Maiden, Martin C J; Parker, Craig T; Cooper, Kerry K; Rose, Erica B; Hiett, Kelli; Bruce, Beau B; Sheppard, Samuel K

Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs

通过 de Bruijn 图进行全基因组上位性和共选择分析

Kuronen, Juri; Horsfield, Samuel T; Pöntinen, Anna K; Mallawaarachchi, Sudaraka; Arredondo-Alonso, Sergio; Thorpe, Harry; Gladstone, Rebecca A; Willems, Rob J L; Bentley, Stephen D; Croucher, Nicholas J; Pensar, Johan; Lees, John A; Tonkin-Hill, Gerry; Corander, Jukka

Causal discovery for the microbiome

微生物组的因果发现

Corander, Jukka; Hanage, William P; Pensar, Johan

Co-evolutionary Signals Identify Burkholderia pseudomallei Survival Strategies in a Hostile Environment

协同进化信号揭示伯克霍尔德氏菌在恶劣环境中的生存策略

Chewapreecha, Claire; Pensar, Johan; Chattagul, Supaksorn; Pesonen, Maiju; Sangphukieo, Apiwat; Boonklang, Phumrapee; Potisap, Chotima; Koosakulnirand, Sirikamon; Feil, Edward J; Dunachie, Susanna; Chantratita, Narisara; Limmathurotsakul, Direk; Peacock, Sharon J; Day, Nick P J; Parkhill, Julian; Thomson, Nicholas R; Sermswan, Rasana W; Corander, Jukka

The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires

用于机器学习分析适应性免疫受体库的immuneML生态系统

Pavlović, Milena; Scheffer, Lonneke; Motwani, Keshav; Kanduri, Chakravarthi; Kompova, Radmila; Vazov, Nikolay; Waagan, Knut; Bernal, Fabian L M; Costa, Alexandre Almeida; Corrie, Brian; Akbar, Rahmad; Al Hajj, Ghadi S; Balaban, Gabriel; Brusko, Todd M; Chernigovskaya, Maria; Christley, Scott; Cowell, Lindsay G; Frank, Robert; Grytten, Ivar; Gundersen, Sveinung; Haff, Ingrid Hobæk; Hovig, Eivind; Hsieh, Ping-Han; Klambauer, Günter; Kuijjer, Marieke L; Lund-Andersen, Christin; Martini, Antonio; Minotto, Thomas; Pensar, Johan; Rand, Knut; Riccardi, Enrico; Robert, Philippe A; Rocha, Artur; Slabodkin, Andrei; Snapkov, Igor; Sollid, Ludvig M; Titov, Dmytro; Weber, Cédric R; Widrich, Michael; Yaari, Gur; Greiff, Victor; Sandve, Geir Kjetil

New Pathogenesis Mechanisms and Translational Leads Identified by Multidimensional Analysis of Necrotizing Myositis in Primates

通过对灵长类动物坏死性肌炎的多维分析,发现了新的发病机制和转化方向

Kachroo, Priyanka; Eraso, Jesus M; Olsen, Randall J; Zhu, Luchang; Kubiak, Samantha L; Pruitt, Layne; Yerramilli, Prasanti; Cantu, Concepcion C; Ojeda Saavedra, Matthew; Pensar, Johan; Corander, Jukka; Jenkins, Leslie; Kao, Lillian; Granillo, Alejandro; Porter, Adeline R; DeLeo, Frank R; Musser, James M

Plasmids Shaped the Recent Emergence of the Major Nosocomial Pathogen Enterococcus faecium

质粒塑造了近期主要医院感染病原体粪肠球菌的出现

Arredondo-Alonso, S; Top, J; McNally, A; Puranen, S; Pesonen, M; Pensar, J; Marttinen, P; Braat, J C; Rogers, M R C; van Schaik, W; Kaski, S; Willems, R J L; Corander, J; Schürch, A C

Genomic rearrangements uncovered by genome-wide co-evolution analysis of a major nosocomial pathogen, Enterococcus faecium

对一种主要医院感染病原体——粪肠球菌进行全基因组共进化分析,揭示了其基因组重排。

Top, Janetta; Arredondo-Alonso, Sergio; Schürch, Anita C; Puranen, Santeri; Pesonen, Maiju; Pensar, Johan; Willems, Rob J L; Corander, Jukka

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

与疾病相关的表皮葡萄球菌共生菌基因型

Méric, Guillaume; Mageiros, Leonardos; Pensar, Johan; Laabei, Maisem; Yahara, Koji; Pascoe, Ben; Kittiwan, Nattinee; Tadee, Phacharaporn; Post, Virginia; Lamble, Sarah; Bowden, Rory; Bray, James E; Morgenstern, Mario; Jolley, Keith A; Maiden, Martin C J; Feil, Edward J; Didelot, Xavier; Miragaia, Maria; de Lencastre, Herminia; Moriarty, T Fintan; Rohde, Holger; Massey, Ruth; Mack, Dietrich; Corander, Jukka; Sheppard, Samuel K

SuperDCA for genome-wide epistasis analysis

SuperDCA用于全基因组上位性分析

Puranen, Santeri; Pesonen, Maiju; Pensar, Johan; Xu, Ying Ying; Lees, John A; Bentley, Stephen D; Croucher, Nicholas J; Corander, Jukka