Perkins Theodore J相关文献与解析，生知库

Differential equation modeling of cell population dynamics in skeletal muscle regeneration from single-cell transcriptomic data

基于单细胞转录组数据的骨骼肌再生过程中细胞群体动力学微分方程建模

期刊:PLoS Computational Biology

影响因子:3.6

doi:10.1371/journal.pcbi.1013575

Al-Ghazawi, Renad; Lezzeik, Hassan; Shao, Xiaojian; Perkins, Theodore J

VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord

VNC-Dist：一种基于机器学习的半自动化流程，用于量化秀丽隐杆线虫腹神经索中的神经元位置。

期刊:PLoS One

影响因子:2.6

doi:10.1371/journal.pone.0331188

Saharkhiz, Saber; Chan, Wesley; Kirezi, Chloe B; Petite, Mearhyn; Roenspies, Tony; Perkins, Theodore J; Colavita, Antonio

Empirical Bayes single nucleotide variant-calling for next-generation sequencing data

基于经验贝叶斯的单核苷酸变异检测方法在下一代测序数据中的应用

期刊:Scientific Reports

影响因子:3.9

doi:10.1038/s41598-024-51958-z

Karimnezhad, Ali; Perkins, Theodore J

发表日期：2024

文献求助收藏

Estimating the Prevalence of GNE Myopathy Using Population Genetic Databases

利用人群遗传数据库估算GNE肌病患病率

期刊:Human Mutation

影响因子:3.7

doi:10.1155/2024/7377504

Derksen, Alexa; Thompson, Rachel; Shaikh, Madeeha; Spendiff, Sally; Perkins, Theodore J; Lochmüller, Hanns

发表日期：2024

文献求助收藏

Identifying transcription factors with cell-type specific DNA binding signatures

鉴定具有细胞类型特异性DNA结合特征的转录因子

期刊:BMC Genomics

影响因子:3.7

doi:10.1186/s12864-024-10859-1

Awdeh, Aseel; Turcotte, Marcel; Perkins, Theodore J

细胞生物学

发表日期：2024

文献求助收藏

Costs of Next-Generation Sequencing Assays in Non-Small Cell Lung Cancer: A Micro-Costing Study

非小细胞肺癌中下一代测序检测的成本：一项微观成本分析研究

期刊:Current Oncology

影响因子:3.4

doi:10.3390/curroncol29080416

Kumar, Srishti; Bennett, Alexandria; Campbell, Pearl A; Palidwor, Gareth; Lo, Bryan; Perkins, Theodore J; Nochaiwong, Surapon; Sekhon, Harmanjatinder S; Stewart, David J; Thavorn, Kednapa

WACS: improving ChIP-seq peak calling by optimally weighting controls

WACS：通过优化控制变量的权重来改进 ChIP-seq 峰值调用

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/s12859-020-03927-2

Awdeh, Aseel; Turcotte, Marcel; Perkins, Theodore J

发表日期：2021

文献求助收藏

Accuracy and reproducibility of somatic point mutation calling in clinical-type targeted sequencing data

临床型靶向测序数据中体细胞点突变检出的准确性和可重复性

期刊:BMC Medical Genomics

影响因子:2

doi:10.1186/s12920-020-00803-z

Karimnezhad, Ali; Palidwor, Gareth A; Thavorn, Kednapa; Stewart, David J; Campbell, Pearl A; Lo, Bryan; Perkins, Theodore J

细胞生物学

发表日期：2020

文献求助收藏

Preclinical rationale for entinostat in embryonal rhabdomyosarcoma.

恩替诺特治疗胚胎性横纹肌肉瘤的临床前理论依据

期刊:Skeletal Muscle

影响因子:4.4

doi:10.1186/s13395-019-0198-x

Bharathy Narendra, Berlow Noah E, Wang Eric, Abraham Jinu, Settelmeyer Teagan P, Hooper Jody E, Svalina Matthew N, Bajwa Zia, Goros Martin W, Hernandez Brian S, Wolff Johannes E, Pal Ranadip, Davies Angela M, Ashok Arya, Bushby Darnell, Mancini Maria, Noakes Christopher, Goodwin Neal C, Ordentlich Peter, Keck James, Hawkins Douglas S, Rudzinski Erin R, Mansoor Atiya, Perkins Theodore J, Vakoc Christopher R, Michalek Joel E, Keller Charles

Genetic network structure and dynamics: identifying simple negative feedback loops

基因网络结构与动态：识别简单的负反馈回路

Differential equation modeling of cell population dynamics in skeletal muscle regeneration from single-cell transcriptomic data

基于单细胞转录组数据的骨骼肌再生过程中细胞群体动力学微分方程建模

VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord

VNC-Dist：一种基于机器学习的半自动化流程，用于量化秀丽隐杆线虫腹神经索中的神经元位置。

Empirical Bayes single nucleotide variant-calling for next-generation sequencing data

基于经验贝叶斯的单核苷酸变异检测方法在下一代测序数据中的应用

Estimating the Prevalence of GNE Myopathy Using Population Genetic Databases

利用人群遗传数据库估算GNE肌病患病率

Identifying transcription factors with cell-type specific DNA binding signatures

鉴定具有细胞类型特异性DNA结合特征的转录因子

Costs of Next-Generation Sequencing Assays in Non-Small Cell Lung Cancer: A Micro-Costing Study

非小细胞肺癌中下一代测序检测的成本：一项微观成本分析研究

WACS: improving ChIP-seq peak calling by optimally weighting controls

WACS：通过优化控制变量的权重来改进 ChIP-seq 峰值调用

Accuracy and reproducibility of somatic point mutation calling in clinical-type targeted sequencing data

临床型靶向测序数据中体细胞点突变检出的准确性和可重复性

Preclinical rationale for entinostat in embryonal rhabdomyosarcoma.

恩替诺特治疗胚胎性横纹肌肉瘤的临床前理论依据