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Identifying the driver miRNAs with somatic copy number alterations driving dysregulated ceRNA networks in cancers

识别具有体细胞拷贝数变异并驱动癌症中ceRNA网络失调的驱动miRNA

期刊:Biology Direct

影响因子:4.9

doi:10.1186/s13062-023-00438-x

Dou, Renjie; Kang, Shaobo; Yang, Huan; Zhang, Wanmei; Zhang, Yijing; Liu, Yuanyuan; Ping, Yanyan; Pang, Bo

Dissecting cellular states of infiltrating microenvironment cells in melanoma by integrating single-cell and bulk transcriptome analysis

通过整合单细胞和整体转录组分析，解析黑色素瘤浸润微环境细胞的细胞状态

期刊:BMC Immunology

影响因子:2.7

doi:10.1186/s12865-023-00587-8

Shi, Aiai; Yan, Min; Pang, Bo; Pang, Lin; Wang, Yihan; Lan, Yujia; Zhang, Xinxin; Xu, Jinyuan; Ping, Yanyan; Hu, Jing

Functional regulations between genetic alteration-driven genes and drug target genes acting as prognostic biomarkers in breast cancer

基因改变驱动基因与药物靶基因之间的功能调控，可作为乳腺癌的预后生物标志物

期刊:Scientific Reports

影响因子:3.9

doi:10.1038/s41598-022-13835-5

Wang, Li; Yu, Lei; Shi, Jian; Li, Feng; Zhang, Caiyu; Xu, Haotian; Yin, Xiangzhe; Wang, Lixia; Lin, Shihua; Litvinova, Anastasiia; Ping, Yanyan; Ning, Shangwei; Zhao, Hongying

Dynamic regulatory networks of T cell trajectory dissect transcriptional control of T cell state transition

T细胞轨迹的动态调控网络揭示了T细胞状态转变的转录调控机制

期刊:Molecular Therapy-Nucleic Acids

影响因子:6.1

doi:10.1016/j.omtn.2021.10.011

Yan, Min; Hu, Jing; Yuan, Huating; Xu, Liwen; Liao, Gaoming; Jiang, Zedong; Zhu, Jiali; Pang, Bo; Ping, Yanyan; Zhang, Yunpeng; Xiao, Yun; Li, Xia

Single-Cell Transcriptomic Analysis Reveals a Tumor-Reactive T Cell Signature Associated With Clinical Outcome and Immunotherapy Response In Melanoma

单细胞转录组分析揭示黑色素瘤中与临床结果和免疫治疗反应相关的肿瘤反应性T细胞特征

期刊:Frontiers in Immunology

影响因子:5.9

doi:10.3389/fimmu.2021.758288

Yan, Min; Hu, Jing; Ping, Yanyan; Xu, Liwen; Liao, Gaoming; Jiang, Zedong; Pang, Bo; Sun, Shangqin; Zhang, Yunpeng; Xiao, Yun; Li, Xia

Transcriptomic heterogeneity of driver gene mutations reveals novel mutual exclusivity and improves exploration of functional associations

驱动基因突变的转录组异质性揭示了新的互斥性，并有助于探索功能关联。

期刊:Cancer Medicine

影响因子:3.1

doi:10.1002/cam4.4039

Lan, Yujia; Liu, Wei; Zhang, Wanmei; Hu, Jing; Zhu, Xiaojing; Wan, Linyun; A, Suru; Ping, Yanyan; Xiao, Yun

发表日期：2021

文献求助收藏

Identifying Key Somatic Copy Number Alterations Driving Dysregulation of Cancer Hallmarks in Lower-Grade Glioma

识别驱动低级别胶质瘤癌症标志失调的关键体细胞拷贝数变异

期刊:Frontiers in Genetics

影响因子:2.8

doi:10.3389/fgene.2021.654736

Zhou, Yao; Wang, Shuai; Yan, Haoteng; Pang, Bo; Zhang, Xinxin; Pang, Lin; Wang, Yihan; Xu, Jinyuan; Hu, Jing; Lan, Yujia; Ping, Yanyan

Prognostic impact of a lymphocyte activation-associated gene signature in GBM based on transcriptome analysis

基于转录组分析的淋巴细胞活化相关基因特征在胶质母细胞瘤预后中的作用

期刊:PeerJ

影响因子:2.4

doi:10.7717/peerj.12070

Lan, Yujia; Zhao, Erjie; Zhang, Xinxin; Zhu, Xiaojing; Wan, Linyun; A, Suru; Ping, Yanyan; Wang, Yihan

细胞生物学

发表日期：2021

文献求助收藏

Dissecting the Functional Mechanisms of Somatic Copy-Number Alterations Based on Dysregulated ceRNA Networks across Cancers

基于癌症中失调的ceRNA网络解析体细胞拷贝数变异的功能机制

期刊:Molecular Therapy-Nucleic Acids

影响因子:6.1

doi:10.1016/j.omtn.2020.06.012

Ping, Yanyan; Zhou, Yao; Hu, Jing; Pang, Lin; Xu, Chaohan; Xiao, Yun

IMOP-Cancer: identifying mutation order pairs impacting cancer phenotypes

IMOP-Cancer：识别影响癌症表型的突变顺序对

Identifying the driver miRNAs with somatic copy number alterations driving dysregulated ceRNA networks in cancers

识别具有体细胞拷贝数变异并驱动癌症中ceRNA网络失调的驱动miRNA

Dissecting cellular states of infiltrating microenvironment cells in melanoma by integrating single-cell and bulk transcriptome analysis

通过整合单细胞和整体转录组分析，解析黑色素瘤浸润微环境细胞的细胞状态

Functional regulations between genetic alteration-driven genes and drug target genes acting as prognostic biomarkers in breast cancer

基因改变驱动基因与药物靶基因之间的功能调控，可作为乳腺癌的预后生物标志物

Dynamic regulatory networks of T cell trajectory dissect transcriptional control of T cell state transition

T细胞轨迹的动态调控网络揭示了T细胞状态转变的转录调控机制

Single-Cell Transcriptomic Analysis Reveals a Tumor-Reactive T Cell Signature Associated With Clinical Outcome and Immunotherapy Response In Melanoma

单细胞转录组分析揭示黑色素瘤中与临床结果和免疫治疗反应相关的肿瘤反应性T细胞特征

Transcriptomic heterogeneity of driver gene mutations reveals novel mutual exclusivity and improves exploration of functional associations

驱动基因突变的转录组异质性揭示了新的互斥性，并有助于探索功能关联。

Identifying Key Somatic Copy Number Alterations Driving Dysregulation of Cancer Hallmarks in Lower-Grade Glioma

识别驱动低级别胶质瘤癌症标志失调的关键体细胞拷贝数变异

Prognostic impact of a lymphocyte activation-associated gene signature in GBM based on transcriptome analysis

基于转录组分析的淋巴细胞活化相关基因特征在胶质母细胞瘤预后中的作用

Dissecting the Functional Mechanisms of Somatic Copy-Number Alterations Based on Dysregulated ceRNA Networks across Cancers

基于癌症中失调的ceRNA网络解析体细胞拷贝数变异的功能机制