日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS

利用DreaMS对数百万个串联质谱数据进行分子表征的自监督学习

Bushuiev, Roman; Bushuiev, Anton; Samusevich, Raman; Brungs, Corinna; Sivic, Josef; Pluskal, Tomáš

Comparability of Liquid Chromatography Tandem Mass Spectrometry Analysis of Dissolved Organic Matter across Laboratories

不同实验室间液相色谱串联质谱分析溶解性有机物的可比性

Kalinski, Jarmo-Charles; Ruiz Brandão da Costa, Bruno; Schramm, Tilman; Buckett, Lance R; Carlson, Laura T; Coffey, Nicole R; Damiani, Tito; Dechent, Elias; Abiead, Yasin El; Heuckeroth, Steffen; Jennings, Elaine K; Kaesler, Jan; Stock, Naomi L; Orme, Alice M; Torres, Ralph R; Trojahn, Sara; Whelton, Helen L; Yan, Yingfei; Aron, Allegra T; Boiteau, Rene M; Bull, Ian D; Dorrestein, Pieter C; Dang, Duc Huy; Evershed, Richard P; Gledhill, Marta; Gleixner, Gerd; Haas, Andreas F; Hansen, Martin; Harder, Tilmann; Hopmans, Ellen C; Ingalls, Anitra E; Karst, Uwe; Kew, William; Kido Soule, Melissa; Koch, Boris P; Kujawinski, Elizabeth B; Lechtenfeld, Oliver J; Longnecker, Krista; Pluskal, Tomáš; Pohnert, Georg; Redman, Zachary C; Rivas-Ubach, Albert; Schmitt-Kopplin, Philippe; Singer, Gabriel; Tebben, Jan; Tomco, Patrick L; Ward, Nicholas D; Aluwihare, Lihini I; Simon, Carsten; Hawkes, Jeffrey; Petras, Daniel

Community Curation of Microbial Metabolites Enables Biological Insights of Metabolomics Data

社区对微生物代谢物的管理有助于深入了解代谢组学数据的生物学意义

Mannochio-Russo, Helena; Gonçalves Nunes, Wilhan D; Xing, Shipei; de Oliveira, Fernanda; Caraballo-Rodríguez, Andrés Mauricio; Gomes, Paulo Wender Portal; Charron-Lamoureux, Vincent; Agongo, Julius; Avalon, Nicole E; Bui, Tammy; Cancelada, Lucia; Chevrette, Marc G; Cumsille, Andrés; de Araújo, Moysés B; De Graeve, Marilyn; Deleray, Victoria; Donia, Mohamed S; Dzveta, Mutsawashe B; El Abiead, Yasin; Ellis, Ronald J; Franklin, Donald Jr; Garg, Neha; Gouda, Harsha; Djande, Claude Y Hamany; Hiskia, Anastasia; Ho, Benjamin N; Hughes, Chambers C; Hwang, Sunghoon; Iliakopoulou, Sofia; Iudicello, Jennifer E; Jarmusch, Alan K; Kaloudis, Triantafyllos; Koester, Irina; Konkel, Robert; Koolen, Hector H F; Kvitne, Kine Eide; La Rosa, Sabina Leanti; Lam, Anny; Lamichhane, Santosh; Lephatsi, Motseoa; Letendre, Scott; Magyari, Sarolt; Mazur-Marzec, Hanna; McDonald, Daniel; Mohanty, Ipsita; Monge-Loría, Mónica; Moore, David J; Veiga, Thiago André Moura; Mulaudzi, Musiwalo S; Nephali, Lerato; Nguyen, Griffith; Orságh, Martin; Patan, Abubaker; Pluskal, Tomáš; Pope, Phillip B; de Medeiros, Lívia Soman; Stincone, Paolo; Tekel, Andrej; Thomas, Sydney; Torres, Ralph R; Tsunoda, Shirley M; Tugizimana, Fidele; van Faassen, Martijn; Vasquez-Castro, Felipe; Vitale, Giovanni A; Wagner, Berenike C; Wang, Crystal X; Zervou, Sevasti-Kiriaki; Zhao, Haoqi Nina; Zuffa, Simone; Petras, Daniel; McCall, Laura-Isobel; Knight, Rob; Wang, Mingxun; Dorrestein, Pieter C

MS(n)Lib: efficient generation of open multi-stage fragmentation mass spectral libraries

MS(n)Lib:高效生成开放式多级碎片质谱库

Brungs, Corinna; Schmid, Robin; Heuckeroth, Steffen; Mazumdar, Aninda; Drexler, Matúš; Šácha, Pavel; Dorrestein, Pieter C; Petras, Daniel; Nothias, Louis-Felix; Veverka, Václav; Nencka, Radim; Kameník, Zdeněk; Pluskal, Tomáš

A universal language for finding mass spectrometry data patterns

用于寻找质谱数据模式的通用语言

Damiani, Tito; Jarmusch, Alan K; Aron, Allegra T; Petras, Daniel; Phelan, Vanessa V; Zhao, Haoqi Nina; Bittremieux, Wout; Acharya, Deepa D; Ahmed, Mohammed M A; Bauermeister, Anelize; Bertin, Matthew J; Boudreau, Paul D; Borges, Ricardo M; Bowen, Benjamin P; Brown, Christopher J; Chagas, Fernanda O; Clevenger, Kenneth D; Correia, Mario S P; Crandall, William J; Crüsemann, Max; Fahy, Eoin; Fiehn, Oliver; Garg, Neha; Gerwick, William H; Gilbert, Jeffrey R; Globisch, Daniel; Gomes, Paulo Wender P; Heuckeroth, Steffen; James, C Andrew; Jarmusch, Scott A; Kakhkhorov, Sarvar A; Kang, Kyo Bin; Kessler, Nikolas; Kersten, Roland D; Kim, Hyunwoo; Kirk, Riley D; Kohlbacher, Oliver; Kontou, Eftychia E; Liu, Ken; Lizama-Chamu, Itzel; Luu, Gordon T; Luzzatto Knaan, Tal; Mannochio-Russo, Helena; Marty, Michael T; Matsuzawa, Yuki; McAvoy, Andrew C; McCall, Laura-Isobel; Mohamed, Osama G; Nahor, Omri; Neuweger, Heiko; Niedermeyer, Timo H J; Nishida, Kozo; Northen, Trent R; Overdahl, Kirsten E; Rainer, Johannes; Reher, Raphael; Rodriguez, Elys; Sachsenberg, Timo T; Sanchez, Laura M; Schmid, Robin; Stevens, Cole; Subramaniam, Shankar; Tian, Zhenyu; Tripathi, Ashootosh; Tsugawa, Hiroshi; van der Hooft, Justin J J; Vicini, Andrea; Walter, Axel; Weber, Tilmann; Xiong, Quanbo; Xu, Tao; Pluskal, Tomáš; Dorrestein, Pieter C; Wang, Mingxun

Author Correction: A universal language for finding mass spectrometry data patterns

作者更正:用于查找质谱数据模式的通用语言

Damiani, Tito; Jarmusch, Alan K; Aron, Allegra T; Petras, Daniel; Phelan, Vanessa V; Zhao, Haoqi Nina; Bittremieux, Wout; Acharya, Deepa D; Ahmed, Mohammed M A; Bauermeister, Anelize; Bertin, Matthew J; Boudreau, Paul D; Borges, Ricardo M; Bowen, Benjamin P; Brown, Christopher J; Chagas, Fernanda O; Clevenger, Kenneth D; Correia, Mario S P; Crandall, William J; Crüsemann, Max; Fahy, Eoin; Fiehn, Oliver; Garg, Neha; Gerwick, William H; Gilbert, Jeffrey R; Globisch, Daniel; Gomes, Paulo Wender P; Heuckeroth, Steffen; James, C Andrew; Jarmusch, Scott A; Kakhkhorov, Sarvar A; Kang, Kyo Bin; Kessler, Nikolas; Kersten, Roland D; Kim, Hyunwoo; Kirk, Riley D; Kohlbacher, Oliver; Kontou, Eftychia E; Liu, Ken; Lizama-Chamu, Itzel; Luu, Gordon T; Luzzatto Knaan, Tal; Mannochio-Russo, Helena; Marty, Michael T; Matsuzawa, Yuki; McAvoy, Andrew C; McCall, Laura-Isobel; Mohamed, Osama G; Nahor, Omri; Neuweger, Heiko; Niedermeyer, Timo H J; Nishida, Kozo; Northen, Trent R; Overdahl, Kirsten E; Rainer, Johannes; Reher, Raphael; Rodriguez, Elys; Sachsenberg, Timo T; Sanchez, Laura M; Schmid, Robin; Stevens, Cole; Subramaniam, Shankar; Tian, Zhenyu; Tripathi, Ashootosh; Tsugawa, Hiroshi; van der Hooft, Justin J J; Vicini, Andrea; Walter, Axel; Weber, Tilmann; Xiong, Quanbo; Xu, Tao; Pluskal, Tomáš; Dorrestein, Pieter C; Wang, Mingxun

Using structured libraries, selection, and machine learning to rapidly explore the sequence space of a fluorescent deoxyribozyme

利用结构化文库、筛选和机器学习快速探索荧光脱氧核酶的序列空间

Kurfürst, Jaroslav; Volek, Martin; Samusevich, Raman; Pluskal, Tomáš; Curtis, Edward A

Functional Characterization of Luciferase in a Brittle Star Indicates Parallel Evolution Influenced by Genomic Availability of Haloalkane Dehalogenase

对海星中荧光素酶的功能表征表明,基因组中卤代烷脱卤酶的可用性影响了平行进化。

Lau, Emily S; Majerova, Marika; Hensley, Nicholai M; Mukherjee, Arnab; Vasina, Michal; Pluskal, Daniel; Damborsky, Jiri; Prokop, Zbynek; Delroisse, Jérôme; Bayaert, Wendy-Shirley; Parey, Elise; Oliveri, Paola; Marlétaz, Ferdinand; Marek, Martin; Oakley, Todd H

Bacterial Fluorinase FIA1 and Evolutionarily Related, Lysine-free StDUF62 Show Distinct Diastereoselectivity and Salt Sensitivity

细菌氟化酶FIA1和进化相关的无赖氨酸StDUF62表现出不同的非对映选择性和盐敏感性

Tekel, Andrej; Orságh, Martin; Dračínský, Martin; Pluskal, Tomáš

An evaluation methodology for machine learning-based tandem mass spectra similarity prediction

一种基于机器学习的串联质谱相似性预测评估方法

Strobel, Michael; Gil-de-la-Fuente, Alberto; Zare Shahneh, Mohammad Reza; Abiead, Yasin El; Bushuiev, Roman; Bushuiev, Anton; Pluskal, Tomáš; Wang, Mingxun