日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Multi-species analysis of inflammatory response elements reveals ancient and lineage-specific contributions of transposable elements to NF-kB binding

对炎症反应元件的多物种分析揭示了转座元件对 NF-κB 结合的古老且谱系特异性的贡献

Wang, Liangxi; Taylor, Tiegh; Rathnakumar, Kumaragurubaran; Khyzha, Nadiya; Liang, Minggao; Alizada, Azad; Campitelli, Laura F; Pour, Sara E; Patel, Zain M; Antounians, Lina; Tobias, Ian C; Hou, Huayun; Hughes, Timothy R; Roy, Sushmita; Mitchell, Jennifer A; Fish, Jason E; Wilson, Michael D

Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台基序发现和基准测试,以探索研究较少的人类转录因子的结合特异性

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台DNA基序发现和基准测试,以探索研究较少的人类转录因子的结合特异性

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

RNA-binding proteins that lack canonical RNA-binding domains are rarely sequence-specific

缺乏典型RNA结合域的RNA结合蛋白很少具有序列特异性。

Ray, Debashish; Laverty, Kaitlin U; Jolma, Arttu; Nie, Kate; Samson, Reuben; Pour, Sara E; Tam, Cyrus L; von Krosigk, Niklas; Nabeel-Shah, Syed; Albu, Mihai; Zheng, Hong; Perron, Gabrielle; Lee, Hyunmin; Najafabadi, Hamed; Blencowe, Benjamin; Greenblatt, Jack; Morris, Quaid; Hughes, Timothy R

PRIESSTESS: interpretable, high-performing models of the sequence and structure preferences of RNA-binding proteins.

PRIESSTESS:可解释的、高性能的 RNA 结合蛋白序列和结构偏好模型

Laverty Kaitlin U, Jolma Arttu, Pour Sara E, Zheng Hong, Ray Debashish, Morris Quaid, Hughes Timothy R