日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

textToKnowledgeGraph: generation of molecular interaction knowledge graphs using large language models for exploration in Cytoscape

textToKnowledgeGraph:使用大型语言模型在 Cytoscape 中生成分子相互作用知识图谱以进行探索

James, Favour; Pratt, Dexter; Churas, Christopher; Luna, Augustin

Publisher Correction: Multimodal cell maps as a foundation for structural and functional genomics

出版商更正:多模态细胞图谱作为结构和功能基因组学的基础

Schaffer, Leah V; Hu, Mengzhou; Qian, Gege; Moon, Kyung-Mee; Pal, Abantika; Soni, Neelesh; Latham, Andrew P; Pontano Vaites, Laura; Tsai, Dorothy; Mattson, Nicole M; Licon, Katherine; Bachelder, Robin; Cesnik, Anthony; Gaur, Ishan; Le, Trang; Leineweber, William; Palar, Aji; Pulido, Ernst; Qin, Yue; Zhao, Xiaoyu; Churas, Christopher; Lenkiewicz, Joanna; Chen, Jing; Ono, Keiichiro; Pratt, Dexter; Zage, Peter; Echeverria, Ignacia; Sali, Andrej; Harper, J Wade; Gygi, Steven P; Foster, Leonard J; Huttlin, Edward L; Lundberg, Emma; Ideker, Trey

Multimodal cell maps as a foundation for structural and functional genomics

多模态细胞图谱作为结构和功能基因组学的基础

Schaffer, Leah V; Hu, Mengzhou; Qian, Gege; Moon, Kyung-Mee; Pal, Abantika; Soni, Neelesh; Latham, Andrew P; Pontano Vaites, Laura; Tsai, Dorothy; Mattson, Nicole M; Licon, Katherine; Bachelder, Robin; Cesnik, Anthony; Gaur, Ishan; Le, Trang; Leineweber, William; Palar, Aji; Pulido, Ernst; Qin, Yue; Zhao, Xiaoyu; Churas, Christopher; Lenkiewicz, Joanna; Chen, Jing; Ono, Keiichiro; Pratt, Dexter; Zage, Peter; Echeverria, Ignacia; Sali, Andrej; Harper, J Wade; Gygi, Steven P; Foster, Leonard J; Huttlin, Edward L; Lundberg, Emma; Ideker, Trey

Informatics at the Frontier of Cancer Research

癌症研究前沿的信息学

Noller, Kathleen; Botsis, Taxiarchis; Camara, Pablo G; Ciotti, Lauren; Cooper, Lee A D; Goecks, Jeremy; Griffith, Malachi; Haas, Brian J; Ideker, Trey; Karchin, Rachel; Kontos, Despina; Lai, Jiaying; Marcus, Daniel; Meyer, Clifford A; Naegle, Kristen; Pati, Sarthak; Peters, Bjoern; Pratt, Dexter; Raphael, Benjamin J; Reich, Michael; Savova, Guergana K; Wright, Carrie; Fertig, Elana J; Bakas, Spyridon

Cytoscape Web: bringing network biology to the browser

Cytoscape Web:将网络生物学引入浏览器

Ono, Keiichiro; Fong, Dylan; Gao, Chengzhan; Churas, Christopher; Pillich, Rudolf; Lenkiewicz, Joanna; Pratt, Dexter; Pico, Alexander R; Hanspers, Kristina; Xin, Yihang; Morris, John; Kucera, Mike; Franz, Max; Lopes, Christian; Bader, Gary; Ideker, Trey; Chen, Jing

State of the interactomes: an evaluation of molecular networks for generating biological insights

相互作用组的状态:评估分子网络以产生生物学见解

Wright, Sarah N; Colton, Scott; Schaffer, Leah V; Pillich, Rudolf T; Churas, Christopher; Pratt, Dexter; Ideker, Trey

Global siRNA screen identifies human host factors critical for SARS-CoV-2 replication and late stages of infection.

全球 siRNA 筛选确定了对 SARS-CoV-2 复制和感染后期至关重要的人类宿主因子

Yin Xin, Pu Yuan, Yuan Shuofeng, Pache Lars, Churas Christopher, Weston Stuart, Riva Laura, Simons Lacy M, Cisneros William J, Clausen Thomas, Biddle Grace, Doss-Gollin Simon, Deming Meagan, De Jesus Paul D, Kim Ha Na, Fuentes Daniel, Whitelock John M, Esko Jeffrey D, Lord Megan S, Mena Ignacio, García-Sastre Adolfo, Hultquist Judd F, Frieman Matthew B, Ideker Trey, Pratt Dexter, Martin-Sancho Laura, Chanda Sumit K

textToKnowledgeGraph: Generation of Molecular Interaction Knowledge Graphs Using Large Language Models for Exploration in Cytoscape

textToKnowledgeGraph:利用大型语言模型在 Cytoscape 中生成分子相互作用知识图谱以进行探索

James, Favour; Churas, Christopher; Pratt, Dexter; Luna, Augustin

Cell Mapping Toolkit: an end-to-end pipeline for mapping subcellular organization

细胞图谱绘制工具包:用于绘制亚细胞结构图谱的端到端流程

Lenkiewicz, Joanna; Churas, Christopher; Hu, Mengzhou; Qian, Gege; Jain, Mayank; Levinson, Maxwell Adam; Al Manir, Sadnan; Qin, Yue; Fong, Dylan; Ono, Keiichiro; Chen, Jing; Gao, Chengzhan; Pratt, Dexter; Parker, Jillian A; Clark, Timothy; Ideker, Trey; Schaffer, Leah V

Drugst.One - a plug-and-play solution for online systems medicine and network-based drug repurposing

Drugst.One——一个即插即用的在线系统医学和基于网络的药物再利用解决方案

Maier, Andreas; Hartung, Michael; Abovsky, Mark; Adamowicz, Klaudia; Bader, Gary D; Baier, Sylvie; Blumenthal, David B; Chen, Jing; Elkjaer, Maria L; Garcia-Hernandez, Carlos; Helmy, Mohamed; Hoffmann, Markus; Jurisica, Igor; Kotlyar, Max; Lazareva, Olga; Levi, Hagai; List, Markus; Lobentanzer, Sebastian; Loscalzo, Joseph; Malod-Dognin, Noel; Manz, Quirin; Matschinske, Julian; Mee, Miles; Oubounyt, Mhaned; Pastrello, Chiara; Pico, Alexander R; Pillich, Rudolf T; Poschenrieder, Julian M; Pratt, Dexter; Pržulj, Nataša; Sadegh, Sepideh; Saez-Rodriguez, Julio; Sarkar, Suryadipto; Shaked, Gideon; Shamir, Ron; Trummer, Nico; Turhan, Ugur; Wang, Rui-Sheng; Zolotareva, Olga; Baumbach, Jan