日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Publisher Correction: The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

出版商更正:ENCODE 插补挑战:对跨细胞类型表观基因组谱插补方法的批判性评估

Schreiber, Jacob Matthew; Boix, Carles A; Wook Lee, Jin; Li, Hongyang; Guan, Yuanfang; Chang, Chun-Chieh; Chang, Jen-Chien; Hawkins-Hooker, Alex; Schölkopf, Bernhard; Schweikert, Gabriele; Carulla, Mateo Rojas; Canakoglu, Arif; Guzzo, Francesco; Nanni, Luca; Masseroli, Marco; Carman, Mark James; Pinoli, Pietro; Hong, Chenyang; Yip, Kevin Y; Spence, Jefrey P; Batra, Sanjit Singh; Song, Yun S; Mahony, Shaun; Zhang, Zheng; Tan, Wuwei; Shen, Yang; Sun, Yuanfei; Shi, Minyi; Adrian, Jessika; Sandstrom, Richard S; Farrell, Nina P; Halow, Jessica M; Lee, Kristen; Jiang, Lixia; Yang, Xinqiong; Epstein, Charles B; Strattan, J Seth; Bernstein, Bradley E; Snyder, Michael P; Kellis, Manolis; Noble, William S; Kundaje, Anshul Bharat

The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

ENCODE 插补挑战:对跨细胞类型表观基因组谱插补方法的批判性评估

Schreiber, Jacob Matthew; Boix, Carles A; Wook Lee, Jin; Li, Hongyang; Guan, Yuanfang; Chang, Chun-Chieh; Chang, Jen-Chien; Hawkins-Hooker, Alex; Schölkopf, Bernhard; Schweikert, Gabriele; Carulla, Mateo Rojas; Canakoglu, Arif; Guzzo, Francesco; Nanni, Luca; Masseroli, Marco; Carman, Mark James; Pinoli, Pietro; Hong, Chenyang; Yip, Kevin Y; Spence, Jefrey P; Batra, Sanjit Singh; Song, Yun S; Mahony, Shaun; Zhang, Zheng; Tan, Wuwei; Shen, Yang; Sun, Yuanfei; Shi, Minyi; Adrian, Jessika; Sandstrom, Richard S; Farrell, Nina P; Halow, Jessica M; Lee, Kristen; Jiang, Lixia; Yang, Xinqiong; Epstein, Charles B; Strattan, J Seth; Bernstein, Bradley E; Snyder, Michael P; Kellis, Manolis; Noble, William S; Kundaje, Anshul Bharat

Inaccessible LCG Promoters Act as Safeguards to Restrict T Cell Development to Appropriate Notch Signaling Environments.

不可及的 LCG 启动子作为保障措施,将 T 细胞发育限制在合适的 Notch 信号环境中

Furuyama Suzanne, Wu Qian Vicky, Varnum-Finney Barbara, Sandstrom Richard, Meuleman Wouter, Stamatoyannopoulos John A, Bernstein Irwin D

Global reference mapping of human transcription factor footprints

人类转录因子足迹的全球参考映射

Vierstra, Jeff; Lazar, John; Sandstrom, Richard; Halow, Jessica; Lee, Kristen; Bates, Daniel; Diegel, Morgan; Dunn, Douglas; Neri, Fidencio; Haugen, Eric; Rynes, Eric; Reynolds, Alex; Nelson, Jemma; Johnson, Audra; Frerker, Mark; Buckley, Michael; Kaul, Rajinder; Meuleman, Wouter; Stamatoyannopoulos, John A

Index and biological spectrum of human DNase I hypersensitive sites

人类DNase I超敏位点的索引和生物学谱

Meuleman, Wouter; Muratov, Alexander; Rynes, Eric; Halow, Jessica; Lee, Kristen; Bates, Daniel; Diegel, Morgan; Dunn, Douglas; Neri, Fidencio; Teodosiadis, Athanasios; Reynolds, Alex; Haugen, Eric; Nelson, Jemma; Johnson, Audra; Frerker, Mark; Buckley, Michael; Sandstrom, Richard; Vierstra, Jeff; Kaul, Rajinder; Stamatoyannopoulos, John

Mapping and Dynamics of Regulatory DNA in Maturing Arabidopsis thaliana Siliques

拟南芥成熟角果中调控DNA的定位和动态变化

Sullivan, Alessandra M; Arsovski, Andrej A; Thompson, Agnieszka; Sandstrom, Richard; Thurman, Robert E; Neph, Shane; Johnson, Audra K; Sullivan, Shawn T; Sabo, Peter J; Neri, Fidencio V 3rd; Weaver, Molly; Diegel, Morgan; Nemhauser, Jennifer L; Stamatoyannopoulos, John A; Bubb, Kerry L; Queitsch, Christine

Cell-of-origin chromatin organization shapes the mutational landscape of cancer

起源细胞染色质的组织结构塑造了癌症的突变图谱。

Polak, Paz; Karlić, Rosa; Koren, Amnon; Thurman, Robert; Sandstrom, Richard; Lawrence, Michael; Reynolds, Alex; Rynes, Eric; Vlahoviček, Kristian; Stamatoyannopoulos, John A; Sunyaev, Shamil R

Integrative analysis of 111 reference human epigenomes

对111个人类参考表观基因组的整合分析

Kundaje, Anshul; Meuleman, Wouter; Ernst, Jason; Bilenky, Misha; Yen, Angela; Heravi-Moussavi, Alireza; Kheradpour, Pouya; Zhang, Zhizhuo; Wang, Jianrong; Ziller, Michael J; Amin, Viren; Whitaker, John W; Schultz, Matthew D; Ward, Lucas D; Sarkar, Abhishek; Quon, Gerald; Sandstrom, Richard S; Eaton, Matthew L; Wu, Yi-Chieh; Pfenning, Andreas R; Wang, Xinchen; Claussnitzer, Melina; Liu, Yaping; Coarfa, Cristian; Harris, R Alan; Shoresh, Noam; Epstein, Charles B; Gjoneska, Elizabeta; Leung, Danny; Xie, Wei; Hawkins, R David; Lister, Ryan; Hong, Chibo; Gascard, Philippe; Mungall, Andrew J; Moore, Richard; Chuah, Eric; Tam, Angela; Canfield, Theresa K; Hansen, R Scott; Kaul, Rajinder; Sabo, Peter J; Bansal, Mukul S; Carles, Annaick; Dixon, Jesse R; Farh, Kai-How; Feizi, Soheil; Karlic, Rosa; Kim, Ah-Ram; Kulkarni, Ashwinikumar; Li, Daofeng; Lowdon, Rebecca; Elliott, GiNell; Mercer, Tim R; Neph, Shane J; Onuchic, Vitor; Polak, Paz; Rajagopal, Nisha; Ray, Pradipta; Sallari, Richard C; Siebenthall, Kyle T; Sinnott-Armstrong, Nicholas A; Stevens, Michael; Thurman, Robert E; Wu, Jie; Zhang, Bo; Zhou, Xin; Beaudet, Arthur E; Boyer, Laurie A; De Jager, Philip L; Farnham, Peggy J; Fisher, Susan J; Haussler, David; Jones, Steven J M; Li, Wei; Marra, Marco A; McManus, Michael T; Sunyaev, Shamil; Thomson, James A; Tlsty, Thea D; Tsai, Li-Huei; Wang, Wei; Waterland, Robert A; Zhang, Michael Q; Chadwick, Lisa H; Bernstein, Bradley E; Costello, Joseph F; Ecker, Joseph R; Hirst, Martin; Meissner, Alexander; Milosavljevic, Aleksandar; Ren, Bing; Stamatoyannopoulos, John A; Wang, Ting; Kellis, Manolis

Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution

天然延伸转录本测序揭示了核苷酸分辨率的人类转录活性

Mayer, Andreas; di Iulio, Julia; Maleri, Seth; Eser, Umut; Vierstra, Jeff; Reynolds, Alex; Sandstrom, Richard; Stamatoyannopoulos, John A; Churchman, L Stirling

Large-scale identification of sequence variants influencing human transcription factor occupancy in vivo

大规模鉴定影响人体内转录因子占位的序列变异

Maurano, Matthew T; Haugen, Eric; Sandstrom, Richard; Vierstra, Jeff; Shafer, Anthony; Kaul, Rajinder; Stamatoyannopoulos, John A