日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Leveraging spectrum of graph sheaf Laplacian as a genome-architecture-aware measure of microbiome diversity

利用图层拉普拉斯算子的谱作为基因组结构感知的微生物组多样性度量

Sapoval, Nicolae; Treangen, Todd J; Nakhleh, Luay

A survey of computational approaches for characterizing microbial interactions in microbial mats

微生物垫中微生物相互作用表征的计算方法综述

Perillo, Vanesa L; Nute, Michael; Sapoval, Nicolae; Curry, Kristen D; Golia, Logan; Yin, Yongze; Ogilvie, Huw A; Nakhleh, Luay; Segarra, Santiago; Bhaya, Devaki; Cuadrado, Diana G; Treangen, Todd J

Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater

Crykey:快速识别废水中SARS-CoV-2的隐性突变

Liu, Yunxi; Sapoval, Nicolae; Gallego-García, Pilar; Tomás, Laura; Posada, David; Treangen, Todd J; Stadler, Lauren B

Olivar: automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens.

Olivar:用于病原体多重拼接扩增子测序的自动化变异感知引物设计

Wang Michael X, Lou Esther G, Sapoval Nicolae, Kim Eddie, Kalvapalle Prashant, Kille Bryce, Elworth R A Leo, Liu Yunxi, Fu Yilei, Stadler Lauren B, Treangen Todd J

Direct comparison of RT-ddPCR and targeted amplicon sequencing for SARS-CoV-2 mutation monitoring in wastewater

直接比较RT-ddPCR和靶向扩增子测序在废水SARS-CoV-2突变监测中的应用

Lou, Esther G; Sapoval, Nicolae; McCall, Camille; Bauhs, Lauren; Carlson-Stadler, Russell; Kalvapalle, Prashant; Lai, Yanlai; Palmer, Kyle; Penn, Ryker; Rich, Whitney; Wolken, Madeline; Brown, Pamela; Ensor, Katherine B; Hopkins, Loren; Treangen, Todd J; Stadler, Lauren B

KOMB: K-core based de novo characterization of copy number variation in microbiomes

KOMB:基于K-core的微生物组拷贝数变异的从头表征

Balaji, Advait; Sapoval, Nicolae; Seto, Charlie; Leo Elworth, R A; Fu, Yilei; Nute, Michael G; Savidge, Tor; Segarra, Santiago; Treangen, Todd J

Limited genomic reconstruction of SARS-CoV-2 transmission history within local epidemiological clusters

对局部流行病聚集区内SARS-CoV-2传播史进行有限的基因组重建

Gallego-García, Pilar; Varela, Nair; Estévez-Gómez, Nuria; De Chiara, Loretta; Fernández-Silva, Iria; Valverde, Diana; Sapoval, Nicolae; Treangen, Todd J; Regueiro, Benito; Cabrera-Alvargonzález, Jorge Julio; Del Campo, Víctor; Pérez, Sonia; Posada, David

QuaID: Enabling Earlier Detection of Recently Emerged SARS-CoV-2 Variants of Concern in Wastewater

QuaID:能够更早地检测废水中新出现的SARS-CoV-2关注变种

Sapoval, Nicolae; Liu, Yunxi; Lou, Esther G; Hopkins, Loren; Ensor, Katherine B; Schneider, Rebecca; Stadler, Lauren B; Treangen, Todd J

The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms

第三届国际黑客马拉松,旨在将大规模基因组组成分析的洞见应用于各种生物体的实际案例。

Walker, Kimberly; Kalra, Divya; Lowdon, Rebecca; Chen, Guangyi; Molik, David; Soto, Daniela C; Dabbaghie, Fawaz; Khleifat, Ahmad Al; Mahmoud, Medhat; Paulin, Luis F; Raza, Muhammad Sohail; Pfeifer, Susanne P; Agustinho, Daniel Paiva; Aliyev, Elbay; Avdeyev, Pavel; Barrozo, Enrico R; Behera, Sairam; Billingsley, Kimberley; Chong, Li Chuin; Choubey, Deepak; De Coster, Wouter; Fu, Yilei; Gener, Alejandro R; Hefferon, Timothy; Henke, David Morgan; Höps, Wolfram; Illarionova, Anastasia; Jochum, Michael D; Jose, Maria; Kesharwani, Rupesh K; Kolora, Sree Rohit Raj; Kubica, Jędrzej; Lakra, Priya; Lattimer, Damaris; Liew, Chia-Sin; Lo, Bai-Wei; Lo, Chunhsuan; Lötter, Anneri; Majidian, Sina; Mendem, Suresh Kumar; Mondal, Rajarshi; Ohmiya, Hiroko; Parvin, Nasrin; Peralta, Carolina; Poon, Chi-Lam; Prabhakaran, Ramanandan; Saitou, Marie; Sammi, Aditi; Sanio, Philippe; Sapoval, Nicolae; Syed, Najeeb; Treangen, Todd; Wang, Gaojianyong; Xu, Tiancheng; Yang, Jianzhi; Zhang, Shangzhe; Zhou, Weiyu; Sedlazeck, Fritz J; Busby, Ben

SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission

SARS-CoV-2基因组多样性及其对qRT-PCR诊断和传播的影响

Sapoval, Nicolae; Mahmoud, Medhat; Jochum, Michael D; Liu, Yunxi; Elworth, R A Leo; Wang, Qi; Albin, Dreycey; Ogilvie, Huw A; Lee, Michael D; Villapol, Sonia; Hernandez, Kyle M; Maljkovic Berry, Irina; Foox, Jonathan; Beheshti, Afshin; Ternus, Krista; Aagaard, Kjersti M; Posada, David; Mason, Christopher E; Sedlazeck, Fritz J; Treangen, Todd J