日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A Murine Database of Structural Variants Identifies A Candidate Gene for a Spontaneous Murine Lymphoma Model

小鼠结构变异数据库鉴定出一种自发性小鼠淋巴瘤模型的候选基因

Ren, Wenlong; Fang, Zhuoqing; Dolzhenko, Egor; Saunders, Christopher T; Cheng, Zhuanfen; Popic, Victoria; Peltz, Gary

The Platinum Pedigree: a long-read benchmark for genetic variants

白金谱系:基因变异的长读长基准

Kronenberg, Zev; Nolan, Cillian; Porubsky, David; Mokveld, Tom; Rowell, William J; Lee, Sangjin; Dolzhenko, Egor; Chang, Pi-Chuan; Holt, James M; Saunders, Christopher T; Olson, Nathan D; Steely, Cody J; McGee, Sean; Guarracino, Andrea; Koundinya, Nidhi; Harvey, William T; Watkins, W Scott; Munson, Katherine M; Hoekzema, Kendra; Chua, Khi Pin; Chen, Xiao; Fanslow, Cairbre; Lambert, Christine; Dashnow, Harriet; Garrison, Erik; Smith, Joshua D; Lansdorp, Peter M; Zook, Justin M; Carroll, Andrew; Jorde, Lynn B; Neklason, Deborah W; Quinlan, Aaron R; Eichler, Evan E; Eberle, Michael A

Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition.

同步长读长基因组、甲基化组、表观基因组和转录组分析揭示了孟德尔遗传病的成因

Vollger Mitchell R, Korlach Jonas, Eldred Kiara C, Swanson Elliott, Underwood Jason G, Bohaczuk Stephanie C, Mao Yizi, Cheng Yong-Han H, Ranchalis Jane, Blue Elizabeth E, Schwarze Ulrike, Munson Katherine M, Saunders Christopher T, Wenger Aaron M, Allworth Aimee, Chanprasert Sirisak, Duerden Brittney L, Glass Ian, Horike-Pyne Martha, Kim Michelle, Leppig Kathleen A, McLaughlin Ian J, Ogawa Jessica, Rosenthal Elisabeth A, Sheppeard Sam, Sherman Stephanie M, Strohbehn Samuel, Yuen Amy L, Stacey Andrew W, Reh Thomas A, Byers Peter H, Bamshad Michael J, Hisama Fuki M, Jarvik Gail P, Sancak Yasemin, Dipple Katrina M, Stergachis Andrew B

Complex structural variant visualization with SVTopo

利用 SVTopo 进行复杂结构变异可视化

Belyeu, Jonathan R; Rowell, William J; Lake, Juniper A; Holt, James Matthew; Kronenberg, Zev; Saunders, Christopher T; Eberle, Michael A

LCSkPOA: enabling banded semi-global partial order alignments via efficient and accurate backbone generation through extended LCSk+

LCSkPOA:通过扩展的LCSk+实现高效、精确的主链生成,从而实现带状半全局部分顺序比对

Weerakoon, Minindu; Saunders, Christopher T; Heaton, Haynes

Sawfish: improving long-read structural variant discovery and genotyping with local haplotype modeling

Sawfish:利用局部单倍型模型改进长读长结构变异发现和基因分型

Saunders, Christopher T; Holt, James M; Baker, Daniel N; Lake, Juniper A; Belyeu, Jonathan R; Kronenberg, Zev; Rowell, William J; Eberle, Michael A

A Murine Database of Structural Variants Enables the Genetic Architecture of a Spontaneous Murine Lymphoma to be Characterized

小鼠结构变异数据库可用于表征自发性小鼠淋巴瘤的遗传结构

Ren, Wenlong; Fang, Zhuoqing; Dolzhenko, Egor; Saunders, Christopher T; Cheng, Zhuanfen; Popic, Victoria; Peltz, Gary

StarPhase: Comprehensive Phase-Aware Pharmacogenomic Diplotyper for Long-Read Sequencing Data

StarPhase:用于长读长测序数据的综合性相位感知药物基因组学双端测序仪

Holt, James M; Harting, John; Chen, Xiao; Baker, Daniel; Saunders, Christopher T; Kronenberg, Zev; Gonzaludo, Nina; Yoo, Byunggil; Hudjashov, Georgi; Jõeloo, Maarja; Lawlor, James M J; Lim, Weng Khong; Jamuar, Saumya S; Cooper, Gregory M; Milani, Lili; Pastinen, Tomi; Eberle, Michael A

HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing

HiPhase:对来自 HiFi 测序的小型、结构性和串联重复序列变异进行联合定相

Holt, James M; Saunders, Christopher T; Rowell, William J; Kronenberg, Zev; Wenger, Aaron M; Eberle, Michael

REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

REViewer:基于单倍型解析的串联重复序列及其周围序列比对可视化

Dolzhenko, Egor; Weisburd, Ben; Ibañez, Kristina; Rajan-Babu, Indhu-Shree; Anyansi, Christine; Bennett, Mark F; Billingsley, Kimberley; Carroll, Ashley; Clamons, Samuel; Danzi, Matt C; Deshpande, Viraj; Ding, Jinhui; Fazal, Sarah; Halman, Andreas; Jadhav, Bharati; Qiu, Yunjiang; Richmond, Phillip A; Saunders, Christopher T; Scheffler, Konrad; van Vugt, Joke J F A; Zwamborn, Ramona R A J; Chong, Samuel S; Friedman, Jan M; Tucci, Arianna; Rehm, Heidi L; Eberle, Michael A