日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A fully automated benchmarking suite to compare macromolecular complexes

一套用于比较大分子复合物的全自动基准测试套件

Studer, Gabriel; Robin, Xavier; Bienert, Stefan; Durairaj, Janani; Škrinjar, Peter; Tauriello, Gerardo; Waterhouse, Andrew Mark; Schwede, Torsten

Progress and Bottlenecks for Deep Learning in Computational Structure Biology: CASP Round XVI

计算结构生物学中深度学习的进展与瓶颈:CASP 第十六轮

Kryshtafovych, Andriy; Schwede, Torsten; Topf, Maya; Fidelis, Krzysztof; Moult, John

Beyond Single Chains: Benchmarking Macromolecular Complex Prediction Methods With the Continuous Automated Model EvaluatiOn (CAMEO)

超越单链:利用连续自动模型评估(CAMEO)对大分子复合物预测方法进行基准测试

Robin, Xavier; Škrinjar, Peter; Waterhouse, Andrew M; Studer, Gabriel; Tauriello, Gerardo; Durairaj, Janani; Schwede, Torsten

Protein Target Highlights in CASP16: Insights From the Structure Providers

CASP16 中的蛋白质靶点亮点:来自结构提供者的见解

Alexander, Leila T; Follonier, Océane M; Kryshtafovych, Andriy; Abesamis, Kim; Bibi-Triki, Sabrina; Box, Henry G; Breyton, Cécile; Bringel, Françoise; Carrique, Loic; d'Acapito, Alessio; Dong, Gang; DuBois, Rebecca; Fass, Deborah; Fiesco, Juliana Martinez; Fox, Daniel R; Grimes, Jonathan M; Grinter, Rhys; Jenkins, Matthew; Kamyshinsky, Roman; Keown, Jeremy R; Lackner, Gerald; Lammers, Michael; Liu, Shiheng; Lovering, Andrew L; Malinauskas, Tomas; Masquida, Benoît; Palm, Gottfried J; Siebold, Christian; Su, Tiantian; Zhang, Ping; Zhou, Z Hong; Fidelis, Krzysztof; Topf, Maya; Moult, John; Schwede, Torsten

Global profiling of protein complex dynamics with an experimental library of protein interaction markers

利用蛋白质相互作用标记物的实验库对蛋白质复合物动力学进行全局分析

Dörig, Christian; Marulli, Cathy; Peskett, Thomas; Volkmar, Norbert; Pantolini, Lorenzo; Studer, Gabriel; Paleari, Camilla; Frommelt, Fabian; Schwede, Torsten; de Souza, Natalie; Barral, Yves; Picotti, Paola

AlphaPulldown2-a general pipeline for high-throughput structural modeling

AlphaPulldown2——一种用于高通量结构建模的通用流程

Molodenskiy, Dmitry; Maurer, Valentin J; Yu, Dingquan; Chojnowski, Grzegorz; Bienert, Stefan; Tauriello, Gerardo; Gilep, Konstantin; Schwede, Torsten; Kosinski, Jan

The structure assessment web server: for proteins, complexes and more

结构评估网络服务器:适用于蛋白质、复合物等

Waterhouse, Andrew M; Studer, Gabriel; Robin, Xavier; Bienert, Stefan; Tauriello, Gerardo; Schwede, Torsten

IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods

IHMCIF:PDBx/mmCIF 数据标准的扩展,用于整合结构测定方法

Vallat, Brinda; Webb, Benjamin M; Westbrook, John D; Goddard, Thomas D; Hanke, Christian A; Graziadei, Andrea; Peisach, Ezra; Zalevsky, Arthur; Sagendorf, Jared; Tangmunarunkit, Hongsuda; Voinea, Serban; Sekharan, Monica; Yu, Jian; Bonvin, Alexander A M J J; DiMaio, Frank; Hummer, Gerhard; Meiler, Jens; Tajkhorshid, Emad; Ferrin, Thomas E; Lawson, Catherine L; Leitner, Alexander; Rappsilber, Juri; Seidel, Claus A M; Jeffries, Cy M; Burley, Stephen K; Hoch, Jeffrey C; Kurisu, Genji; Morris, Kyle; Patwardhan, Ardan; Velankar, Sameer; Schwede, Torsten; Trewhella, Jill; Kesselman, Carl; Berman, Helen M; Sali, Andrej

Structural implications of BK polyomavirus sequence variations in the major viral capsid protein Vp1 and large T-antigen: a computational study

BK多瘤病毒序列变异对主要病毒衣壳蛋白Vp1和大T抗原的结构影响:一项计算研究

Durairaj, Janani; Follonier, Océane M; Leuzinger, Karoline; Alexander, Leila T; Wilhelm, Maud; Pereira, Joana; Hillenbrand, Caroline A; Weissbach, Fabian H; Schwede, Torsten; Hirsch, Hans H

Embedding-based alignment: combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone

基于嵌入的比对:结合蛋白质语言模型和动态规划比对来检测模糊区中的结构相似性

Pantolini, Lorenzo; Studer, Gabriel; Pereira, Joana; Durairaj, Janani; Tauriello, Gerardo; Schwede, Torsten