日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Metabolic independence drives gut microbial colonization and resilience in health and disease

代谢独立性驱动肠道微生物定植和健康和疾病状态下的抵抗力。

Watson, Andrea R; Füssel, Jessika; Veseli, Iva; DeLongchamp, Johanna Zaal; Silva, Marisela; Trigodet, Florian; Lolans, Karen; Shaiber, Alon; Fogarty, Emily; Runde, Joseph M; Quince, Christopher; Yu, Michael K; Söylev, Arda; Morrison, Hilary G; Lee, Sonny T M; Kao, Dina; Rubin, David T; Jabri, Bana; Louie, Thomas; Eren, A Murat

System-wide transcriptome damage and tissue identity loss in COVID-19 patients

COVID-19 患者的全系统转录组损伤和组织身份丧失

Jiwoon Park, Jonathan Foox, Tyler Hether, David C Danko, Sarah Warren, Youngmi Kim, Jason Reeves, Daniel J Butler, Christopher Mozsary, Joel Rosiene, Alon Shaiber, Evan E Afshin, Matthew MacKay, André F Rendeiro, Yaron Bram, Vasuretha Chandar, Heather Geiger, Arryn Craney, Priya Velu, Ari M Melnick,

High molecular weight DNA extraction strategies for long-read sequencing of complex metagenomes

复杂宏基因组长读测序的高分子量DNA提取策略

Florian Trigodet, Karen Lolans, Emily Fogarty, Alon Shaiber, Hilary G Morrison, Luis Barreiro, Bana Jabri, A Murat Eren

Community-led, integrated, reproducible multi-omics with anvi'o

社区主导、整合、可重复的多组学与 anvi'o

Eren, A Murat; Kiefl, Evan; Shaiber, Alon; Veseli, Iva; Miller, Samuel E; Schechter, Matthew S; Fink, Isaac; Pan, Jessica N; Yousef, Mahmoud; Fogarty, Emily C; Trigodet, Florian; Watson, Andrea R; Esen, Özcan C; Moore, Ryan M; Clayssen, Quentin; Lee, Michael D; Kivenson, Veronika; Graham, Elaina D; Merrill, Bryan D; Karkman, Antti; Blankenberg, Daniel; Eppley, John M; Sjödin, Andreas; Scott, Jarrod J; Vázquez-Campos, Xabier; McKay, Luke J; McDaniel, Elizabeth A; Stevens, Sarah L R; Anderson, Rika E; Fuessel, Jessika; Fernandez-Guerra, Antonio; Maignien, Lois; Delmont, Tom O; Willis, Amy D

Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

SARS-CoV-2 感染的散弹枪转录组、空间组学和等温分析揭示了独特的宿主反应、病毒多样化和药物相互作用

Daniel Butler #, Christopher Mozsary #, Cem Meydan #, Jonathan Foox #, Joel Rosiene #, Alon Shaiber #, David Danko #, Ebrahim Afshinnekoo, Matthew MacKay, Fritz J Sedlazeck, Nikolay A Ivanov, Maria Sierra, Diana Pohle, Michael Zietz, Undina Gisladottir, Vijendra Ramlall, Evan T Sholle, Edward J Sche

Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs.

在数千个癌症基因组图中发现了不同类别的复杂结构变异

Hadi Kevin, Yao Xiaotong, Behr Julie M, Deshpande Aditya, Xanthopoulakis Charalampos, Tian Huasong, Kudman Sarah, Rosiene Joel, Darmofal Madison, DeRose Joseph, Mortensen Rick, Adney Emily M, Shaiber Alon, Gajic Zoran, Sigouros Michael, Eng Kenneth, Wala Jeremiah A, Wrzeszczyński Kazimierz O, Arora Kanika, Shah Minita, Emde Anne-Katrin, Felice Vanessa, Frank Mayu O, Darnell Robert B, Ghandi Mahmoud, Huang Franklin, Dewhurst Sally, Maciejowski John, de Lange Titia, Setton Jeremy, Riaz Nadeem, Reis-Filho Jorge S, Powell Simon, Knowles David A, Reznik Ed, Mishra Bud, Beroukhim Rameen, Zody Michael C, Robine Nicolas, Oman Kenji M, Sanchez Carissa A, Kuhner Mary K, Smith Lucian P, Galipeau Patricia C, Paulson Thomas G, Reid Brian J, Li Xiaohong, Wilkes David, Sboner Andrea, Mosquera Juan Miguel, Elemento Olivier, Imielinski Marcin

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

人类口腔微生物组中神秘成员的生态位分化的功能和遗传标记

Shaiber, Alon; Willis, Amy D; Delmont, Tom O; Roux, Simon; Chen, Lin-Xing; Schmid, Abigail C; Yousef, Mahmoud; Watson, Andrea R; Lolans, Karen; Esen, Özcan C; Lee, Sonny T M; Downey, Nora; Morrison, Hilary G; Dewhirst, Floyd E; Mark Welch, Jessica L; Eren, A Murat

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

SARS-CoV-2 感染的散弹枪转录组和等温分析揭示了独特的宿主反应、病毒多样化和药物相互作用

Daniel J Butler, Christopher Mozsary, Cem Meydan, David Danko, Jonathan Foox, Joel Rosiene, Alon Shaiber, Ebrahim Afshinnekoo, Matthew MacKay, Fritz J Sedlazeck, Nikolay A Ivanov, Maria Sierra, Diana Pohle, Michael Zietz, Undina Gisladottir, Vijendra Ramlall, Craig D Westover, Krista Ryon, Benjamin

The Wolbachia mobilome in Culex pipiens includes a putative plasmid

淡色库蚊中的沃尔巴克氏体可移动基因组包含一个推定的质粒

Reveillaud, Julie; Bordenstein, Sarah R; Cruaud, Corinne; Shaiber, Alon; Esen, Özcan C; Weill, Mylène; Makoundou, Patrick; Lolans, Karen; Watson, Andrea R; Rakotoarivony, Ignace; Bordenstein, Seth R; Eren, A Murat

Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes

固氮菌群,如浮霉菌和变形菌,在表层海洋宏基因组中含量丰富。

Delmont, Tom O; Quince, Christopher; Shaiber, Alon; Esen, Özcan C; Lee, Sonny Tm; Rappé, Michael S; McLellan, Sandra L; Lücker, Sebastian; Eren, A Murat