日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Discovering subnetworks in SBML models

在SBML模型中发现子网络

Hellerstein, Joseph L; Smith, Lucian P; Tatka, Lillian T; Andrews, Steven S; Kochen, Michael A; Sauro, Herbert M

Speciated evolution of oscillatory mass-action chemical reaction networks

振荡质量作用化学反应网络的物种演化

Tatka, Lillian T; Smith, Lucian P; Sauro, Herbert M

The simulation experiment description markup language (SED-ML): language specification for level 1 version 5

仿真实验描述标记语言(SED-ML):1级版本5的语言规范

Smith, Lucian P; Bergmann, Frank T; Garny, Alan; Helikar, Tomáš; Karr, Jonathan; Nickerson, David; Sauro, Herbert; Waltemath, Dagmar; König, Matthias

Adapting modeling and simulation credibility standards to computational systems biology

将建模和仿真可信度标准应用于计算系统生物学

Tatka, Lillian T; Smith, Lucian P; Hellerstein, Joseph L; Sauro, Herbert M

VSCode-Antimony: a source editor for building, analyzing, and translating antimony models

VSCode-Antimony:用于构建、分析和转换锑模型的源代码编辑器

Ma, Steve; Fan, Longxuan; Konanki, Sai Anish; Liu, Eva; Gennari, John H; Smith, Lucian P; Hellerstein, Joseph L; Sauro, Herbert M

Somatic whole genome dynamics of precancer in Barrett's esophagus reveals features associated with disease progression

巴雷特食管癌前病变体细胞全基因组动态变化揭示了与疾病进展相关的特征

Paulson, Thomas G; Galipeau, Patricia C; Oman, Kenji M; Sanchez, Carissa A; Kuhner, Mary K; Smith, Lucian P; Hadi, Kevin; Shah, Minita; Arora, Kanika; Shelton, Jennifer; Johnson, Molly; Corvelo, Andre; Maley, Carlo C; Yao, Xiaotong; Sanghvi, Rashesh; Venturini, Elisa; Emde, Anne-Katrin; Hubert, Benjamin; Imielinski, Marcin; Robine, Nicolas; Reid, Brian J; Li, Xiaohong

BioSimulators: a central registry of simulation engines and services for recommending specific tools

BioSimulators:一个集中式的仿真引擎和服务注册中心,用于推荐特定工具

Shaikh, Bilal; Smith, Lucian P; Vasilescu, Dan; Marupilla, Gnaneswara; Wilson, Michael; Agmon, Eran; Agnew, Henry; Andrews, Steven S; Anwar, Azraf; Beber, Moritz E; Bergmann, Frank T; Brooks, David; Brusch, Lutz; Calzone, Laurence; Choi, Kiri; Cooper, Joshua; Detloff, John; Drawert, Brian; Dumontier, Michel; Ermentrout, G Bard; Faeder, James R; Freiburger, Andrew P; Fröhlich, Fabian; Funahashi, Akira; Garny, Alan; Gennari, John H; Gleeson, Padraig; Goelzer, Anne; Haiman, Zachary; Hasenauer, Jan; Hellerstein, Joseph L; Hermjakob, Henning; Hoops, Stefan; Ison, Jon C; Jahn, Diego; Jakubowski, Henry V; Jordan, Ryann; Kalaš, Matúš; König, Matthias; Liebermeister, Wolfram; Sheriff, Rahuman S Malik; Mandal, Synchon; McDougal, Robert; Medley, J Kyle; Mendes, Pedro; Müller, Robert; Myers, Chris J; Naldi, Aurelien; Nguyen, Tung V N; Nickerson, David P; Olivier, Brett G; Patoliya, Drashti; Paulevé, Loïc; Petzold, Linda R; Priya, Ankita; Rampadarath, Anand K; Rohwer, Johann M; Saglam, Ali S; Singh, Dilawar; Sinha, Ankur; Snoep, Jacky; Sorby, Hugh; Spangler, Ryan; Starruß, Jörn; Thomas, Payton J; van Niekerk, David; Weindl, Daniel; Zhang, Fengkai; Zhukova, Anna; Goldberg, Arthur P; Schaff, James C; Blinov, Michael L; Sauro, Herbert M; Moraru, Ion I; Karr, Jonathan R

Within-patient phylogenetic reconstruction reveals early events in Barrett's Esophagus

患者体内系统发育重建揭示了巴雷特食管的早期事件

Smith, Lucian P; Yamato, Jon A; Galipeau, Patricia C; Paulson, Thomas G; Li, Xiaohong; Sanchez, Carissa A; Reid, Brian J; Kuhner, Mary K

The simulation experiment description markup language (SED-ML): language specification for level 1 version 4

仿真实验描述标记语言(SED-ML):1级版本4的语言规范

Smith, Lucian P; Bergmann, Frank T; Garny, Alan; Helikar, Tomáš; Karr, Jonathan; Nickerson, David; Sauro, Herbert; Waltemath, Dagmar; König, Matthias

Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs.

在数千个癌症基因组图中发现了不同类别的复杂结构变异

Hadi Kevin, Yao Xiaotong, Behr Julie M, Deshpande Aditya, Xanthopoulakis Charalampos, Tian Huasong, Kudman Sarah, Rosiene Joel, Darmofal Madison, DeRose Joseph, Mortensen Rick, Adney Emily M, Shaiber Alon, Gajic Zoran, Sigouros Michael, Eng Kenneth, Wala Jeremiah A, Wrzeszczyński Kazimierz O, Arora Kanika, Shah Minita, Emde Anne-Katrin, Felice Vanessa, Frank Mayu O, Darnell Robert B, Ghandi Mahmoud, Huang Franklin, Dewhurst Sally, Maciejowski John, de Lange Titia, Setton Jeremy, Riaz Nadeem, Reis-Filho Jorge S, Powell Simon, Knowles David A, Reznik Ed, Mishra Bud, Beroukhim Rameen, Zody Michael C, Robine Nicolas, Oman Kenji M, Sanchez Carissa A, Kuhner Mary K, Smith Lucian P, Galipeau Patricia C, Paulson Thomas G, Reid Brian J, Li Xiaohong, Wilkes David, Sboner Andrea, Mosquera Juan Miguel, Elemento Olivier, Imielinski Marcin