日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

PyPop: a mature open-source software pipeline for population genomics

PyPop:一个成熟的开源群体基因组学软件流程

Lancaster, Alexander K; Single, Richard M; Mack, Steven J; Sochat, Vanessa; Mariani, Michael P; Webster, Gordon D

Global analysis of the yeast knockout phenome

酵母敲除表型的整体分析

Gina Turco, Christie Chang, Rebecca Y Wang, Griffin Kim, Emily H Stoops, Brianna Richardson, Vanessa Sochat, Jennifer Rust, Rose Oughtred, Nathaniel Thayer, Fan Kang, Michael S Livstone, Sven Heinicke, Mark Schroeder, Kara J Dolinski, David Botstein, Anastasia Baryshnikova

DataLad: distributed system for joint management of code, data, and their relationship

DataLad:用于联合管理代码、数据及其关系的分布式系统

Halchenko, Yaroslav O; Meyer, Kyle; Poldrack, Benjamin; Solanky, Debanjum Singh; Wagner, Adina S; Gors, Jason; MacFarlane, Dave; Pustina, Dorian; Sochat, Vanessa; Ghosh, Satrajit S; Mönch, Christian; Markiewicz, Christopher J; Waite, Laura; Shlyakhter, Ilya; de la Vega, Alejandro; Hayashi, Soichi; Häusler, Christian Olaf; Poline, Jean-Baptiste; Kadelka, Tobias; Skytén, Kusti; Jarecka, Dorota; Kennedy, David; Strauss, Ted; Cieslak, Matt; Vavra, Peter; Ioanas, Horea-Ioan; Schneider, Robin; Pflüger, Mika; Haxby, James V; Eickhoff, Simon B; Hanke, Michael

Sustainable data analysis with Snakemake

利用 Snakemake 进行可持续数据分析

Mölder, Felix; Jablonski, Kim Philipp; Letcher, Brice; Hall, Michael B; van Dyken, Peter C; Tomkins-Tinch, Christopher H; Sochat, Vanessa; Forster, Jan; Vieira, Filipe G; Meesters, Christian; Lee, Soohyun; Twardziok, Sven O; Kanitz, Alexander; VanCampen, Jake; Malladi, Venkat; Wilm, Andreas; Holtgrewe, Manuel; Rahmann, Sven; Nahnsen, Sven; Köster, Johannes

Ten simple rules for writing Dockerfiles for reproducible data science

编写可复现数据科学 Dockerfile 的十条简单规则

Nüst, Daniel; Sochat, Vanessa; Marwick, Ben; Eglen, Stephen J; Head, Tim; Hirst, Tony; Evans, Benjamin D

The Scientific Filesystem

科学文件系统

Sochat, Vanessa

Singularity: Scientific containers for mobility of compute

奇点:用于计算移动性的科学容器

Kurtzer, Gregory M; Sochat, Vanessa; Bauer, Michael W

Enhancing reproducibility in scientific computing: Metrics and registry for Singularity containers

增强科学计算的可复现性:Singularity 容器的指标和注册表

Sochat, Vanessa V; Prybol, Cameron J; Kurtzer, Gregory M

Sharing brain mapping statistical results with the neuroimaging data model

将脑图谱统计结果与神经影像数据模型共享

Maumet, Camille; Auer, Tibor; Bowring, Alexander; Chen, Gang; Das, Samir; Flandin, Guillaume; Ghosh, Satrajit; Glatard, Tristan; Gorgolewski, Krzysztof J; Helmer, Karl G; Jenkinson, Mark; Keator, David B; Nichols, B Nolan; Poline, Jean-Baptiste; Reynolds, Richard; Sochat, Vanessa; Turner, Jessica; Nichols, Thomas E

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

脑成像数据结构是一种用于组织和描述神经影像实验输出结果的格式。

Gorgolewski, Krzysztof J; Auer, Tibor; Calhoun, Vince D; Craddock, R Cameron; Das, Samir; Duff, Eugene P; Flandin, Guillaume; Ghosh, Satrajit S; Glatard, Tristan; Halchenko, Yaroslav O; Handwerker, Daniel A; Hanke, Michael; Keator, David; Li, Xiangrui; Michael, Zachary; Maumet, Camille; Nichols, B Nolan; Nichols, Thomas E; Pellman, John; Poline, Jean-Baptiste; Rokem, Ariel; Schaefer, Gunnar; Sochat, Vanessa; Triplett, William; Turner, Jessica A; Varoquaux, Gaël; Poldrack, Russell A