日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Temporal nutrition analysis associates dietary regularity and quality with gut microbiome diversity: insights from the Food & You digital cohort

时间营养分析表明,饮食规律性和质量与肠道微生物群多样性相关:来自“食物与你”数字队列的见解

Singh, Rohan; McDonald, Daniel; Hernandez, Alejandra Rios; Song, Se Jin; Bartko, Andrew; Knight, Rob; Salathé, Marcel

Calculating fast differential genome coverages among metagenomic sources using micov

利用micov快速计算宏基因组来源之间的差异基因组覆盖率。

Weng, Yuhan; Guccione, Caitlin; McDonald, Daniel; Oles, Renee; Devkota, Suzanne; Kopylova, Evguenia; Sepich-Poore, Gregory D; Salido, Rodolfo A; Din, M Omar; Song, Se Jin; Curtius, Kit; Chu, Hiutung; Bartko, Andrew; Hasty, Jeff; Knight, Rob

Chronological age estimation from human microbiomes with transformer-based Robust Principal Component Analysis

基于Transformer的稳健主成分分析法从人类微生物组中估计年龄

Myers, Tyler; Song, Se Jin; Chen, Yang; De Pessemier, Britta; Khatib, Lora; McDonald, Daniel; Huang, Shi; Gallo, Richard; Callewaert, Chris; Havulinna, Aki S; Lahti, Leo; Roeselers, Guus; Laiola, Manolo; Shetty, Sudarshan A; Kelley, Scott T; Knight, Rob; Bartko, Andrew

SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx

SARS-CoV-2 的感染性可通过细菌对糖萼的修饰进行调节。

Martino, Cameron; Kellman, Benjamin P; Sandoval, Daniel R; Clausen, Thomas Mandel; Cooper, Robert; Benjdia, Alhosna; Soualmia, Feryel; Clark, Alex E; Garretson, Aaron F; Marotz, Clarisse A; Song, Se Jin; Wandro, Stephen; Zaramela, Livia S; Salido, Rodolfo A; Zhu, Qiyun; Armingol, Erick; Vázquez-Baeza, Yoshiki; McDonald, Daniel; Sorrentino, James T; Taylor, Bryn; Belda-Ferre, Pedro; Das, Promi; Ali, Farhana; Liang, Chenguang; Zhang, Yujie; Schifanella, Luca; Covizzi, Alice; Lai, Alessia; Riva, Agostino; Basting, Christopher; Broedlow, Courtney Ann; Havulinna, Aki S; Jousilahti, Pekka; Estaki, Mehrbod; Kosciolek, Tomasz; Kuplicki, Rayus; Victor, Teresa A; Paulus, Martin P; Savage, Kristen E; Benbow, Jennifer L; Spielfogel, Emma S; Anderson, Cheryl A M; Martinez, Maria Elena; Lacey, James V Jr; Huang, Shi; Haiminen, Niina; Parida, Laxmi; Kim, Ho-Cheol; Gilbert, Jack A; Sweeney, Daniel A; Allard, Sarah M; Swafford, Austin D; Cheng, Susan; Inouye, Michael; Niiranen, Teemu; Jain, Mohit; Salomaa, Veikko; Zengler, Karsten; Klatt, Nichole R; Hasty, Jeff; Berteau, Olivier; Carlin, Aaron F; Esko, Jeffrey D; Lewis, Nathan E; Knight, Rob

A three-country analysis of the gut microbiome indicates taxon associations with diet vary by taxon resolution and population

一项涵盖三个国家的肠道微生物组分析表明,分类群与饮食的关联性因分类群分辨率和人口规模而异。

Khatib, Lora; Song, Se Jin; Dilmore, Amanda H; Sanders, Jon G; Brennan, Caitriona; Hernandez, Alejandra Rios; Myers, Tyler; Oles, Renee; Farmer, Sawyer; Cowart, Charles; Birmingham, Amanda; Diaz, Edgar A; Nizet, Oliver; Gilbert, Kat; Litwin, Nicole; Das, Promi; Nowinski, Brent; Bryant, Mackenzie; Tribelhorn, Caitlin; Sanders-Bodai, Karenina; Chaumont, Soline; Knol, Jan; Roeselers, Guus; Laiola, Manolo; Shetty, Sudarshan A; Veiga, Patrick; Tap, Julien; Derrien, Muriel; Koutnikova, Hana; Cotillard, Aurélie; Lay, Christophe; Tovar, Armando R; Torres, Nimbe; Arteaga, Liliana; González, Antonio; McDonald, Daniel; Bartko, Andrew; Knight, Rob

Streamlined extraction of nucleic acids and metabolites from low- and high-biomass samples using isopropanol and matrix tubes

利用异丙醇和基质管从低生物量和高生物量样品中简化核酸和代谢物的提取

Brennan, Caitriona; Shaffer, Justin P; Belda-Ferre, Pedro; Mohanty, Ipsita; Weng, Yuhan; Cantrell, Kalen; Ackermann, Gail; Allaband, Celeste; Bryant, MacKenzie; Farmer, Sawyer; González, Antonio; McDonald, Daniel; Martino, Cameron; Meehan, Michael J; Rahman, Gibraan; Salido, Rodolfo A; Schwartz, Tara; Song, Se Jin; Tribelhorn, Caitlin; Tubb, Helena M; Dorrestein, Pieter C; Knight, Rob

The impact of breastfeeding on the preterm infant's microbiome and metabolome: a pilot study

母乳喂养对早产儿微生物组和代谢组的影响:一项初步研究

Schulkers Escalante, Keriann; Bai-Tong, Shiyu S; Allard, Sarah M; Ecklu-Mensah, Gertrude; Sanchez, Concepcion; Song, Se Jin; Gilbert, Jack; Bode, Lars; Dorrestein, Pieter; Knight, Rob; Gonzalez, David J; Leibel, Sydney A; Leibel, Sandra L

ChIP provides 10-fold microbial DNA enrichment from tissue while minimizing bias

ChIP技术可从组织中富集10倍的微生物DNA,同时最大限度地减少偏差。

Bhute, Shrikant; Sanders, Jon G; Song, Se Jin; Lavoie, Sydney; Swafford, Austin; Guccione, Caitlin; Patel, Lucas; Gonzalez, Antonio; Rooks, Michelle G; Knight, Rob; Bartko, Andrew

Author Correction: Greengenes2 unifies microbial data in a single reference tree

作者更正:Greengenes2 将微生物数据统一到一个参考树中

McDonald, Daniel; Jiang, Yueyu; Balaban, Metin; Cantrell, Kalen; Zhu, Qiyun; Gonzalez, Antonio; Morton, James T; Nicolaou, Giorgia; Parks, Donovan H; Karst, Søren M; Albertsen, Mads; Hugenholtz, Philip; DeSantis, Todd; Song, Se Jin; Bartko, Andrew; Havulinna, Aki S; Jousilahti, Pekka; Cheng, Susan; Inouye, Michael; Niiranen, Teemu; Jain, Mohit; Salomaa, Veikko; Lahti, Leo; Mirarab, Siavash; Knight, Rob

Correction: Robustness of cancer microbiome signals over a broad range of methodological variation

更正:癌症微生物组信号在广泛的方法学变异范围内的稳健性

Sepich-Poore, Gregory D; McDonald, Daniel; Kopylova, Evguenia; Guccione, Caitlin; Zhu, Qiyun; Austin, George; Carpenter, Carolina; Fraraccio, Serena; Wandro, Stephen; Kosciolek, Tomasz; Janssen, Stefan; Metcalf, Jessica L; Song, Se Jin; Kanbar, Jad; Miller-Montgomery, Sandrine; Heaton, Robert; Mckay, Rana; Patel, Sandip Pravin; Swafford, Austin D; Korem, Tal; Knight, Rob