日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

diaTracer enables spectrum-centric analysis of diaPASEF proteomics data

diaTracer能够对diaPASEF蛋白质组学数据进行以光谱为中心的分析。

Li, Kai; Teo, Guo Ci; Yang, Kevin L; Yu, Fengchao; Nesvizhskii, Alexey I

Post-translational modifications reshape the antigenic landscape of the MHC I immunopeptidome in tumors

翻译后修饰重塑肿瘤中MHC I类免疫肽组的抗原图谱

Kacen, Assaf; Javitt, Aaron; Kramer, Matthias P; Morgenstern, David; Tsaban, Tomer; Shmueli, Merav D; Teo, Guo Ci; da Veiga Leprevost, Felipe; Barnea, Eilon; Yu, Fengchao; Admon, Arie; Eisenbach, Lea; Samuels, Yardena; Schueler-Furman, Ora; Levin, Yishai; Nesvizhskii, Alexey I; Merbl, Yifat

MSBooster: improving peptide identification rates using deep learning-based features

MSBooster:利用基于深度学习的特征提高肽段识别率

Yang, Kevin L; Yu, Fengchao; Teo, Guo Ci; Li, Kai; Demichev, Vadim; Ralser, Markus; Nesvizhskii, Alexey I

Analysis of DIA proteomics data using MSFragger-DIA and FragPipe computational platform

利用 MSFragger-DIA 和 FragPipe 计算平台分析 DIA 蛋白质组学数据

Yu, Fengchao; Teo, Guo Ci; Kong, Andy T; Fröhlich, Klemens; Li, Ginny Xiaohe; Demichev, Vadim; Nesvizhskii, Alexey I

MSFragger-Labile: A Flexible Method to Improve Labile PTM Analysis in Proteomics

MSFragger-Labile:一种用于改进蛋白质组学中不稳定PTM分析的灵活方法

Polasky, Daniel A; Geiszler, Daniel J; Yu, Fengchao; Li, Kai; Teo, Guo Ci; Nesvizhskii, Alexey I

Fast Deisotoping Algorithm and Its Implementation in the MSFragger Search Engine

快速去同位素算法及其在 MSFragger 搜索引擎中的实现

Teo, Guo Ci; Polasky, Daniel A; Yu, Fengchao; Nesvizhskii, Alexey I

Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco

利用 MSFragger-Glyco 进行快速全面的 N- 和 O-糖蛋白组学分析

Polasky, Daniel A; Yu, Fengchao; Teo, Guo Ci; Nesvizhskii, Alexey I

MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets

MassIVE.quant:一个基于定量质谱的蛋白质组学数据集的社区资源

Choi, Meena; Carver, Jeremy; Chiva, Cristina; Tzouros, Manuel; Huang, Ting; Tsai, Tsung-Heng; Pullman, Benjamin; Bernhardt, Oliver M; Hüttenhain, Ruth; Teo, Guo Ci; Perez-Riverol, Yasset; Muntel, Jan; Müller, Maik; Goetze, Sandra; Pavlou, Maria; Verschueren, Erik; Wollscheid, Bernd; Nesvizhskii, Alexey I; Reiter, Lukas; Dunkley, Tom; Sabidó, Eduard; Bandeira, Nuno; Vitek, Olga

Identification of modified peptides using localization-aware open search

利用定位感知开放搜索方法鉴定修饰肽

Yu, Fengchao; Teo, Guo Ci; Kong, Andy T; Haynes, Sarah E; Avtonomov, Dmitry M; Geiszler, Daniel J; Nesvizhskii, Alexey I

Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.

透明细胞肾细胞癌的整合蛋白质基因组学特征分析

Clark David J, Dhanasekaran Saravana M, Petralia Francesca, Pan Jianbo, Song Xiaoyu, Hu Yingwei, da Veiga Leprevost Felipe, Reva Boris, Lih Tung-Shing M, Chang Hui-Yin, Ma Weiping, Huang Chen, Ricketts Christopher J, Chen Lijun, Krek Azra, Li Yize, Rykunov Dmitry, Li Qing Kay, Chen Lin S, Ozbek Umut, Vasaikar Suhas, Wu Yige, Yoo Seungyeul, Chowdhury Shrabanti, Wyczalkowski Matthew A, Ji Jiayi, Schnaubelt Michael, Kong Andy, Sethuraman Sunantha, Avtonomov Dmitry M, Ao Minghui, Colaprico Antonio, Cao Song, Cho Kyung-Cho, Kalayci Selim, Ma Shiyong, Liu Wenke, Ruggles Kelly, Calinawan Anna, Gümüş Zeynep H, Geiszler Daniel, Kawaler Emily, Teo Guo Ci, Wen Bo, Zhang Yuping, Keegan Sarah, Li Kai, Chen Feng, Edwards Nathan, Pierorazio Phillip M, Chen Xi Steven, Pavlovich Christian P, Hakimi A Ari, Brominski Gabriel, Hsieh James J, Antczak Andrzej, Omelchenko Tatiana, Lubinski Jan, Wiznerowicz Maciej, Linehan W Marston, Kinsinger Christopher R, Thiagarajan Mathangi, Boja Emily S, Mesri Mehdi, Hiltke Tara, Robles Ana I, Rodriguez Henry, Qian Jiang, Fenyö David, Zhang Bing, Ding Li, Schadt Eric, Chinnaiyan Arul M, Zhang Zhen, Omenn Gilbert S, Cieslik Marcin, Chan Daniel W, Nesvizhskii Alexey I, Wang Pei, Zhang Hui