日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Evolutionary transfer learning enables organism-wide inference of mammalian enhancer landscapes

进化迁移学习能够对哺乳动物增强子图谱进行全生物体范围的推断

Qiu, Chengxiang; Daza, Riza M; Welsh, Ian C; Patwardhan, Rupali P; Martin, Beth K; Li, Tony; Yang, Shizhao; Kempynck, Niklas; Taylor, Megan L; Fulton, Olivia; Le, Truc-Mai; O'Day, Diana R; Lalanne, Jean-Benoît; Domcke, Silvia; Murray, Stephen A; Aerts, Stein; Trapnell, Cole; Shendure, Jay

Developmental regulation of endothelial-to-hematopoietic transition from induced pluripotent stem cells

诱导多能干细胞向造血细胞转化的发育调控

Wellington, Rachel; Cheng, Xiaoyi; Dutta, Shuvra; Campbell, Clyde A; Trapnell, Cole; Espin-Palazon, Raquel; Hadland, Brandon; Doulatov, Sergei

A statistical framework for inferring genetic requirements from embryo-scale single-cell sequencing experiments

利用胚胎规模单细胞测序实验推断遗传需求的统计框架

Duran, Madeleine; Barkan, Eliza; Tresenrider, Amy; Lee, Heidi; Friedman, Ryan Z; Lammers, Nicholas; Colón, Marazzano; Franks, Jennifer; Ewing, Brent; Kimelman, David; Trapnell, Cole

Embryo-scale single-cell chemical transcriptomics reveals dependencies between cell types and signaling pathways

胚胎尺度单细胞化学转录组学揭示细胞类型和信号通路之间的依赖关系

Barkan, Eliza; Duran, Madeleine; Lammers, Nicholas; Tresenrider, Amy; Jackson, Dana; Lee, Heidi; Haagen, Benjamin; Saunders, Lauren; Abitua, Phil; Kimelman, David; Trapnell, Cole

Single-cell, multi-region profiling of the macaque brain across the lifespan

对猕猴大脑进行终生单细胞、多区域分析

Yang, Wei; Watkins, Kelsi L; DeCasien, Alex R; O'Neill, Mary B; Bohlen, Martin O; O'Day, Diana R; Duran, Madeleine; Qiu, Chengxiang; Meleshko, Anastasia; Vo, Anh; Menke, Melia; Calderon, Diego; Sallet, Jérôme; Higham, James P; Martínez, Melween I; Trapnell, Cole; Starita, Lea M; Montague, Michael J; Platt, Michael L; Chiou, Kenneth L; Shendure, Jay; Snyder-Mackler, Noah

An Improved, High-Yield Method for Isolating Nuclei from Individual Zebrafish Embryos for Single-Nucleus RNA Sequencing

一种改进的、高产的从单个斑马鱼胚胎中分离细胞核用于单核RNA测序的方法

Rostomily, Clifford; Lee, Heidi; Tresenrider, Amy; Daza, Riza; Mullen, Andrew; Shendure, Jay; Kimelman, David; Trapnell, Cole

Understanding genetic variants in context

在特定背景下理解基因变异

Sinnott-Armstrong, Nasa; Fields, Stanley; Roth, Frederick; Starita, Lea M; Trapnell, Cole; Villen, Judit; Fowler, Douglas M; Queitsch, Christine

Single-cell analysis of chromatin and expression reveals age- and sex-associated alterations in the human heart

单细胞染色质和表达分析揭示了人类心脏中与年龄和性别相关的改变

Read, David F; Booth, Gregory T; Daza, Riza M; Jackson, Dana L; Gladden, Rula Green; Srivatsan, Sanjay R; Ewing, Brent; Franks, Jennifer M; Spurrell, Cailyn H; Gomes, Anne Roshella; O'Day, Diana; Gogate, Aishwarya A; Martin, Beth K; Larson, Haleigh; Pfleger, Christian; Starita, Lea; Lin, Yiing; Shendure, Jay; Lin, Shin; Trapnell, Cole

Proteostasis governs differential temperature sensitivity across embryonic cell types.

蛋白质稳态控制着胚胎细胞类型对温度的差异敏感性

Dorrity Michael W, Saunders Lauren M, Duran Madeleine, Srivatsan Sanjay R, Barkan Eliza, Jackson Dana L, Sattler Sydney M, Ewing Brent, Queitsch Christine, Shendure Jay, Raible David W, Kimelman David, Trapnell Cole

Predicting cellular responses to complex perturbations in high-throughput screens

利用高通量筛选预测细胞对复杂扰动的反应

Lotfollahi, Mohammad; Klimovskaia Susmelj, Anna; De Donno, Carlo; Hetzel, Leon; Ji, Yuge; Ibarra, Ignacio L; Srivatsan, Sanjay R; Naghipourfar, Mohsen; Daza, Riza M; Martin, Beth; Shendure, Jay; McFaline-Figueroa, Jose L; Boyeau, Pierre; Wolf, F Alexander; Yakubova, Nafissa; Günnemann, Stephan; Trapnell, Cole; Lopez-Paz, David; Theis, Fabian J