日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Dockground: Expanding the Resource to Protein-DNA Complexes

Dockground:将资源扩展到蛋白质-DNA复合物

Collins, Keeley W; Copeland, Matthew M; Kundrotas, Petras J; Vakser, Ilya A

GRAMMCell: Docking-based Cell Modeling Resource

GRAMMCell:基于对接的细胞建模资源

Singh, Amar; Tytarenko, Andrii M; Ambati, Vineeth Kumar; Copeland, Matthew M; Kundrotas, Petras J; Kasyanov, Pavlo O; Feinberg, Eugene A; Vakser, Ilya A

Dockground: The Resource Expands to Protein-RNA Interactome

Dockground:资源扩展到蛋白质-RNA相互作用组

Collins, Keeley W; Copeland, Matthew M; Kundrotas, Petras J; Vakser, Ilya A

Highly Optimized Simulation of Atomic Resolution Cell-Like Protein Environment

高度优化的原子分辨率类细胞蛋白质环境模拟

Tytarenko, Andrii M; Singh, Amar; Ambati, Vineeth Kumar; Copeland, Matthew M; Kundrotas, Petras J; Halfmann, Randal; Kasyanov, Pavlo O; Feinberg, Eugene A; Vakser, Ilya A

Modeling CAPRI Targets of Round 55 by Combining AlphaFold and Docking

结合 AlphaFold 和 Docker 方法对第 55 轮 CAPRI 目标进行建模。

Singh, Amar; Copeland, Matthew M; Kundrotas, Petras J; Vakser, Ilya A

CAPRI-Q: The CAPRI resource evaluating the quality of predicted structures of protein complexes

CAPRI-Q:CAPRI资源用于评估蛋白质复合物预测结构的质量

Collins, Keeley W; Copeland, Matthew M; Brysbaert, Guillaume; Wodak, Shoshana J; Bonvin, Alexandre M J J; Kundrotas, Petras J; Vakser, Ilya A; Lensink, Marc F

Diffusion of proteins in crowded solutions studied by docking-based modeling

利用基于分子对接的模型研究拥挤溶液中蛋白质的扩散

Singh, Amar; Kundrotas, Petras J; Vakser, Ilya A

Opinion: Protein folds vs. protein folding: Differing questions, different challenges

观点:蛋白质折叠与蛋白质折叠:不同的问题,不同的挑战

Chen, Shi-Jie; Hassan, Mubashir; Jernigan, Robert L; Jia, Kejue; Kihara, Daisuke; Kloczkowski, Andrzej; Kotelnikov, Sergei; Kozakov, Dima; Liang, Jie; Liwo, Adam; Matysiak, Silvina; Meller, Jarek; Micheletti, Cristian; Mitchell, Julie C; Mondal, Sayantan; Nussinov, Ruth; Okazaki, Kei-Ichi; Padhorny, Dzmitry; Skolnick, Jeffrey; Sosnick, Tobin S; Stan, George; Vakser, Ilya; Zou, Xiaoqin; Rose, George D

Docking-based long timescale simulation of cell-size protein systems at atomic resolution

基于分子对接的长时间尺度模拟,以原子分辨率模拟细胞大小的蛋白质系统

Vakser, Ilya A; Grudinin, Sergei; Jenkins, Nathan W; Kundrotas, Petras J; Deeds, Eric J

Dockground resource for protein recognition studies

用于蛋白质识别研究的 Dockground 资源

Collins, Keeley W; Copeland, Matthew M; Kotthoff, Ian; Singh, Amar; Kundrotas, Petras J; Vakser, Ilya A