Valieris相关文献与解析，生知库 | 链接生命科学的每一步

Bianca Bartl #,Ursula E Schoeberl #,Renan Valieris #,Johanna Fitz,Konstantin Roeder,Kutti R Vinothkumar,Benjamin Gundinger,Israel Tojal Da Silva,Rushad Pavri

细胞生物学

发表日期：2026

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Regulators of homologous recombination deficiency identified by machine learning using somatic multi-omics data

利用体细胞多组学数据，通过机器学习方法鉴定同源重组缺陷的调控因子

期刊:Life Science Alliance

影响因子:2.9

doi:10.26508/lsa.202503531

Valieris, Renan; Rosa, Lucas; Martins, Luan; Defelicibus, Alexandre; Carraro, Dirce Maria; Nunes, Diana Noronha; Dias-Neto, Emmanuel; Rosales, Rafael; da Silva, Israel Tojal

Antiviral Monocytes Increase Prior to Detectable HIV-1 Rebound Viremia

抗病毒单核细胞在可检测到 HIV-1 病毒血症反弹之前增加。

期刊:Journal of Infectious Diseases

影响因子:4.5

doi:10.1093/infdis/jiaf367

Farrell-Sherman, Anna; de la Force, Natalia; Prator, Cecilia A; Valieris, Renan; Azam, Walker; Da Silva, Israel; Deeks, Steven G; Thanh, Cassandra; Bosch, Ronald J; Henrich, Timothy J; Cohn, Lillian B

Weakly-supervised deep learning models enable HER2-low prediction from H &E stained slides

弱监督深度学习模型能够从H&E染色切片中预测HER2低表达

期刊:Breast Cancer Research

影响因子:5.6

doi:10.1186/s13058-024-01863-0

Valieris, Renan; Martins, Luan; Defelicibus, Alexandre; Bueno, Adriana Passos; de Toledo Osorio, Cynthia Aparecida Bueno; Carraro, Dirce; Dias-Neto, Emmanuel; Rosales, Rafael A; de Figueiredo, Jose Marcio Barros; Silva, Israel Tojal da

HER2

发表日期：2024

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Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data

利用模拟基因组数据追踪废水中值得关注的SARS-CoV-2变异株：对九种计算工具的评估

期刊:Microbial Genomics

影响因子:4

doi:10.1099/mgen.0.001249

Sutcliffe, Steven G; Kraemer, Susanne A; Ellmen, Isaac; Knapp, Jennifer J; Overton, Alyssa K; Nash, Delaney; Nissimov, Jozef I; Charles, Trevor C; Dreifuss, David; Topolsky, Ivan; Baykal, Pelin I; Fuhrmann, Lara; Jablonski, Kim P; Beerenwinkel, Niko; Levy, Joshua I; Olabode, Abayomi S; Becker, Devan G; Gugan, Gopi; Brintnell, Erin; Poon, Art F Y; Valieris, Renan; Drummond, Rodrigo D; Defelicibus, Alexandre; Dias-Neto, Emmanuel; Rosales, Rafael A; Tojal da Silva, Israel; Orfanou, Aspasia; Psomopoulos, Fotis; Pechlivanis, Nikolaos; Pipes, Lenore; Chen, Zihao; Baaijens, Jasmijn A; Baym, Michael; Shapiro, B Jesse

SARS-CoV-2

发表日期：2024

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Inflammatory Monocytes Increase Prior to Detectable HIV-1 Rebound Viremia

炎症性单核细胞在可检测到 HIV-1 病毒血症反弹之前增加。

期刊:

影响因子:

doi:10.1101/2024.12.24.630257

Farrell-Sherman, Anna; de la Force, Natalia; Prator, Cecila; Valieris, Renan; Azam, Walker; Da Silva, Israel; Deeks, Steven G; Thanh, Cassandra; Bosch, Ronald; Henrich, Timothy J; Cohn, Lillian

Relating mutational signature exposures to clinical data in cancers via signeR 2.0

通过 signeR 2.0 将突变特征暴露与癌症临床数据关联起来

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/s12859-023-05550-3

Drummond, Rodrigo D; Defelicibus, Alexandre; Meyenberg, Mathilde; Valieris, Renan; Dias-Neto, Emmanuel; Rosales, Rafael A; da Silva, Israel Tojal

A comparison between SOLiD 5500XLand Ion Torrent PGM-derived miRNA expression profiles in two breast cell lines

对两种乳腺细胞系中 SOLiD 5500XL 和 Ion Torrent PGM 衍生的 miRNA 表达谱进行比较

期刊:Genetics and Molecular Biology

影响因子:1.3

doi:10.1590/1678-4685-GMB-2018-0351

Branco, Gabriela Pereira; Valieris, Renan; Povoa, Lucas Venezian; Araújo, Luiza Ferreira de; Fernandes, Gustavo Ribeiro; Souza, Jorge Estefano Santana de; Amorim, Maria Galli de; Ferreira, Elisa Napolitano E; Silva, Israel Tojal da; Nunes, Diana Noronha; Dias-Neto, Emmanuel

Influence of BRCA1 Germline Mutations in the Somatic Mutational Burden of Triple-Negative Breast Cancer

BRCA1种系突变对三阴性乳腺癌体细胞突变负荷的影响

期刊:Translational Oncology

影响因子:4.1

doi:10.1016/j.tranon.2019.07.016

Ferreira, Elisa Napolitano; Brianese, Rafael Canfield; de Almeida, Renan Valieris Bueno; Drummond, Rodrigo Duarte; de Souza, Jorge Estefano; da Silva, Israel Tojal; de Souza, Sandro José; Carraro, Dirce Maria

Clonal CD4+ T cells in the HIV-1 latent reservoir display a distinct gene profile upon reactivation

HIV-1潜伏病毒库中的克隆性CD4+ T细胞在重新激活后表现出独特的基因谱。

期刊:Nature Medicine

影响因子:58.7

doi:10.1038/s41591-018-0017-7

Lillian B Cohn ，Israel T da Silva ，Renan Valieris ，Amy S Huang ，Julio C C Lorenzi ，Yehuda Z Cohen ，Joy A Pai ，Allison L Butler ，Marina Caskey ，Mila Jankovic # ，Michel C Nussenzweig #

Somatic hypermutation patterns are shaped by both motif position and sequence grammar

体细胞高频突变模式受基序位置和序列语法的双重影响。

Regulators of homologous recombination deficiency identified by machine learning using somatic multi-omics data

利用体细胞多组学数据，通过机器学习方法鉴定同源重组缺陷的调控因子

Antiviral Monocytes Increase Prior to Detectable HIV-1 Rebound Viremia

抗病毒单核细胞在可检测到 HIV-1 病毒血症反弹之前增加。

Weakly-supervised deep learning models enable HER2-low prediction from H &E stained slides

弱监督深度学习模型能够从H&E染色切片中预测HER2低表达

Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data

利用模拟基因组数据追踪废水中值得关注的SARS-CoV-2变异株：对九种计算工具的评估

Inflammatory Monocytes Increase Prior to Detectable HIV-1 Rebound Viremia

炎症性单核细胞在可检测到 HIV-1 病毒血症反弹之前增加。

Relating mutational signature exposures to clinical data in cancers via signeR 2.0

通过 signeR 2.0 将突变特征暴露与癌症临床数据关联起来

A comparison between SOLiD 5500XLand Ion Torrent PGM-derived miRNA expression profiles in two breast cell lines

对两种乳腺细胞系中 SOLiD 5500XL 和 Ion Torrent PGM 衍生的 miRNA 表达谱进行比较

Influence of BRCA1 Germline Mutations in the Somatic Mutational Burden of Triple-Negative Breast Cancer

BRCA1种系突变对三阴性乳腺癌体细胞突变负荷的影响

Clonal CD4+ T cells in the HIV-1 latent reservoir display a distinct gene profile upon reactivation

HIV-1潜伏病毒库中的克隆性CD4+ T细胞在重新激活后表现出独特的基因谱。