日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Correlating High-dimensional longitudinal microbial features with time-varying outcomes with FLORAL

利用 FLORAL 将高维纵向微生物特征与随时间变化的结果进行关联

Fei, Teng; Donovan, Victoria; Funnell, Tyler; Baichoo, Mirae; Waters, Nicholas R; Paredes, Jenny; Dai, Anqi; Castro, Francesca; Haber, Jennifer; Gradissimo, Ana; Raj, Sandeep S; Lesokhin, Alexander M; Shah, Urvi A; van den Brink, Marcel R M; Peled, Jonathan U

Scalable log-ratio lasso regression for enhanced microbial feature selection with FLORAL.

使用 FLORAL 进行可扩展的对数比率 lasso 回归以增强微生物特征选择

Fei Teng, Funnell Tyler, Waters Nicholas R, Raj Sandeep S, Baichoo Mirae, Sadeghi Keimya, Dai Anqi, Miltiadous Oriana, Shouval Roni, Lv Meng, Peled Jonathan U, Ponce Doris M, Perales Miguel-Angel, Gönen Mithat, van den Brink Marcel R M

Sugar-rich foods exacerbate antibiotic-induced microbiome injury

富含糖分的食物会加剧抗生素引起的微生物群损伤。

Dai, Anqi; Adintori, Peter A; Funnell, Tyler; Jogia, William P; Fei, Teng; Waters, Nicholas R; Rangesa, Madhumitha; Ballweg, Annamaria; Gipson, Brianna; Raj, Sandeep; Hayase, Eiko; Markey, Kate A; Burgos da Silva, Marina; Miltiadous, Oriana; Brambilla, Corrado Zuanelli; Buchan, Marissa Lubin; Peets, Tatnisha; Gradissimo, Ana; Smith, Natalie; Katsamakis, Zoe; Warren, Adam; Amoretti, Luigi A; Duan, Caichen; Zhang, Chenzhen; Matheis, Fanny; Sullivan, Alexis P; Slingerland, John B; Clurman, Annelie; Brereton, Daniel G; Giardina, Paul A; Gomes, Antonio L C; Johnson, Abigail J; Knights, Dan; Jenq, Robert R; Perales, Miguel-Angel; Giralt, Sergio A; Schluter, Jonas; van den Brink, Marcel R M; Peled, Jonathan

Conditioning Regimens are Associated with Distinct Patterns of Microbiota Injury in Allogeneic Hematopoietic Cell Transplantation

预处理方案与同种异体造血干细胞移植中不同的微生物群损伤模式相关

Shouval, Roni; Waters, Nicholas R; Gomes, Antonio L C; Zuanelli Brambilla, Corrado; Fei, Teng; Devlin, Sean M; Nguyen, Chi L; Markey, Kate A; Dai, Anqi; Slingerland, John B; Clurman, Annelie G; Fontana, Emily; Amoretti, Luigi A; Wright, Roberta J; Hohl, Tobias M; Taur, Ying; Sung, Anthony D; Weber, Daniela; Hashimoto, Daigo; Teshima, Takanori; Chao, Nelson J; Holler, Ernst; Scordo, Michael; Giralt, Sergio A; Perales, Miguel-Angel; Peled, Jonathan U; van den Brink, Marcel R M

Enhanced Feature Selection for Microbiome Data using FLORAL: Scalable Log-ratio Lasso Regression

利用 FLORAL 进行微生物组数据的增强特征选择:可扩展的对数比率 Lasso 回归

Fei, Teng; Funnell, Tyler; Waters, Nicholas R; Raj, Sandeep S; Sadeghi, Keimya; Dai, Anqi; Miltiadous, Oriana; Shouval, Roni; Lv, Meng; Peled, Jonathan U; Ponce, Doris M; Perales, Miguel-Angel; Gönen, Mithat; van den Brink, Marcel R M

Early intestinal microbial features are associated with CD4 T-cell recovery after allogeneic hematopoietic transplant

早期肠道微生物特征与异基因造血干细胞移植后CD4 T细胞的恢复相关

Miltiadous, Oriana; Waters, Nicholas R; Andrlová, Hana; Dai, Anqi; Nguyen, Chi L; Burgos da Silva, Marina; Lindner, Sarah; Slingerland, John; Giardina, Paul; Clurman, Annelie; Armijo, Gabriel K; Gomes, Antonio L C; Lakkaraja, Madhavi; Maslak, Peter; Scordo, Michael; Shouval, Roni; Staffas, Anna; O'Reilly, Richard; Taur, Ying; Prockop, Susan; Boelens, Jaap Jan; Giralt, Sergio; Perales, Miguel-Angel; Devlin, Sean M; Peled, Jonathan U; Markey, Kate A; van den Brink, Marcel R M

Easy phylotyping of Escherichia coli via the EzClermont web app and command-line tool

通过 EzClermont 网络应用程序和命令行工具轻松进行大肠杆菌的系统发育分型

Waters, Nicholas R; Abram, Florence; Brennan, Fiona; Holmes, Ashleigh; Pritchard, Leighton

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions

riboSeed:利用原核生物基因组结构进行跨核糖体区域的组装

Waters, Nicholas R; Abram, Florence; Brennan, Fiona; Holmes, Ashleigh; Pritchard, Leighton

A spectrum of CodY activities drives metabolic reorganization and virulence gene expression in Staphylococcus aureus.

CodY 的一系列活性驱动金黄色葡萄球菌的代谢重组和毒力基因表达

Waters Nicholas R, Samuels David J, Behera Ranjan K, Livny Jonathan, Rhee Kyu Y, Sadykov Marat R, Brinsmade Shaun R