日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Conformation-aware structure prediction of antigen-recognizing immune proteins

基于构象感知的抗原识别免疫蛋白结构预测

Dreyer, Frédéric A; Ludwiczak, Jan; Martinkus, Karolis; Abanades, Brennan; Alberstein, Robert G; Kessel, Pan; Rao, Pranav; Lee, Jae Hyeon; Bonneau, Richard; Watkins, Andrew M; Seeger, Franziska

Local structural flexibility drives oligomorphism in computationally designed protein assemblies.

局部结构灵活性驱动计算机设计的蛋白质组装体中的寡形性

Khmelinskaia Alena, Bethel Neville P, Fatehi Farzad, Mallik Bhoomika Basu, Antanasijevic Aleksandar, Borst Andrew J, Lai Szu-Hsueh, Chim Ho Yeung, Wang Jing Yang 'John', Miranda Marcos C, Watkins Andrew M, Ogohara Cassandra, Caldwell Shane, Wu Mengyu, Heck Albert J R, Veesler David, Ward Andrew B, Baker David, Twarock Reidun, King Neil P

OpenFold: retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization

OpenFold:重新训练 AlphaFold2 为其学习机制和泛化能力提供了新的见解

Ahdritz, Gustaf; Bouatta, Nazim; Floristean, Christina; Kadyan, Sachin; Xia, Qinghui; Gerecke, William; O'Donnell, Timothy J; Berenberg, Daniel; Fisk, Ian; Zanichelli, Niccolò; Zhang, Bo; Nowaczynski, Arkadiusz; Wang, Bei; Stepniewska-Dziubinska, Marta M; Zhang, Shang; Ojewole, Adegoke; Guney, Murat Efe; Biderman, Stella; Watkins, Andrew M; Ra, Stephen; Lorenzo, Pablo Ribalta; Nivon, Lucas; Weitzner, Brian; Ban, Yih-En Andrew; Chen, Shiyang; Zhang, Minjia; Li, Conglong; Song, Shuaiwen Leon; He, Yuxiong; Sorger, Peter K; Mostaque, Emad; Zhang, Zhao; Bonneau, Richard; AlQuraishi, Mohammed

Macrocyclic β-Sheets Stabilized by Hydrogen Bond Surrogates

由氢键替代物稳定的大环β-折叠

Nazzaro, Alex; Lu, Brandon; Sawyer, Nicholas; Watkins, Andrew M; Arora, Paramjit S

Cryo-EM-guided engineering of T-box-tRNA modules with enhanced selectivity and sensitivity in translational regulation

利用冷冻电镜技术对T-box-tRNA模块进行工程改造,以提高其在翻译调控中的选择性和灵敏度。

Jia, Xinyu; Zhang, Chong; Luo, Bingnan; Frandsen, Jane K; Watkins, Andrew M; Li, Kaiyu; Zhang, Minghua; Wei, Xiawei; Yang, Yang; Henkin, Tina M; Su, Zhaoming

Anchor Residues Govern Binding and Folding of an Intrinsically Disordered Domain

锚定残基控制固有无序结构域的结合和折叠

Merritt, Haley I; Sawyer, Nicholas; Watkins, Andrew M; Arora, Paramjit S

Theoretical basis for stabilizing messenger RNA through secondary structure design

通过二级结构设计稳定信使RNA的理论基础

Wayment-Steele, Hannah K; Kim, Do Soon; Choe, Christian A; Nicol, John J; Wellington-Oguri, Roger; Watkins, Andrew M; Parra Sperberg, R Andres; Huang, Po-Ssu; Participants, Eterna; Das, Rhiju

Correction to 'Theoretical basis for stabilizing messenger RNA through secondary structure design'

对“通过二级结构设计稳定信使RNA的理论基础”一文的更正

Wayment-Steele, Hannah K; Kim, Do Soon; Choe, Christian A; Nicol, John J; Wellington-Oguri, Roger; Watkins, Andrew M; Parra Sperberg, R Andres; Huang, Po-Ssu; Participants, Eterna; Das, Rhiju

RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers

RNA谜题第四轮:四种核酶和两种适体的三维结构预测

Miao, Zhichao; Adamiak, Ryszard W; Antczak, Maciej; Boniecki, Michał J; Bujnicki, Janusz; Chen, Shi-Jie; Cheng, Clarence Yu; Cheng, Yi; Chou, Fang-Chieh; Das, Rhiju; Dokholyan, Nikolay V; Ding, Feng; Geniesse, Caleb; Jiang, Yangwei; Joshi, Astha; Krokhotin, Andrey; Magnus, Marcin; Mailhot, Olivier; Major, Francois; Mann, Thomas H; Piątkowski, Paweł; Pluta, Radoslaw; Popenda, Mariusz; Sarzynska, Joanna; Sun, Lizhen; Szachniuk, Marta; Tian, Siqi; Wang, Jian; Wang, Jun; Watkins, Andrew M; Wiedemann, Jakub; Xiao, Yi; Xu, Xiaojun; Yesselman, Joseph D; Zhang, Dong; Zhang, Yi; Zhang, Zhenzhen; Zhao, Chenhan; Zhao, Peinan; Zhou, Yuanzhe; Zok, Tomasz; Żyła, Adriana; Ren, Aiming; Batey, Robert T; Golden, Barbara L; Huang, Lin; Lilley, David M; Liu, Yijin; Patel, Dinshaw J; Westhof, Eric

Better together: Elements of successful scientific software development in a distributed collaborative community

携手共进:分布式协作社区中成功科学软件开发的要素

Koehler Leman, Julia; Weitzner, Brian D; Renfrew, P Douglas; Lewis, Steven M; Moretti, Rocco; Watkins, Andrew M; Mulligan, Vikram Khipple; Lyskov, Sergey; Adolf-Bryfogle, Jared; Labonte, Jason W; Krys, Justyna; Bystroff, Christopher; Schief, William; Gront, Dominik; Schueler-Furman, Ora; Baker, David; Bradley, Philip; Dunbrack, Roland; Kortemme, Tanja; Leaver-Fay, Andrew; Strauss, Charlie E M; Meiler, Jens; Kuhlman, Brian; Gray, Jeffrey J; Bonneau, Richard