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Nuclear pleomorphism in canine cutaneous mast cell tumors: Comparison of reproducibility and prognostic relevance between estimates, manual morphometry, and algorithmic morphometry

犬皮肤肥大细胞瘤的核多形性：估计值、手动形态测量和算法形态测量之间可重复性和预后相关性的比较

Haghofer, Andreas; Parlak, Eda; Bartel, Alexander; Donovan, Taryn A; Assenmacher, Charles-Antoine; Bolfa, Pompei; Dark, Michael J; Fuchs-Baumgartinger, Andrea; Klang, Andrea; Jäger, Kathrin; Klopfleisch, Robert; Merz, Sophie; Richter, Barbara; Schulman, F Yvonne; Janout, Hannah; Ganz, Jonathan; Scharinger, Josef; Aubreville, Marc; Winkler, Stephan M; Kiupel, Matti; Bertram, Christof A

细胞生物学

肥大细胞

发表日期：2025

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Automated Nuclear Morphometry: A Deep Learning Approach for Prognostication in Canine Pulmonary Carcinoma to Enhance Reproducibility

自动化核形态测量：一种用于犬肺癌预后预测的深度学习方法，以提高预测结果的可重复性

期刊:Veterinary Sciences

影响因子:2.3

doi:10.3390/vetsci11060278

Glahn, Imaine; Haghofer, Andreas; Donovan, Taryn A; Degasperi, Brigitte; Bartel, Alexander; Kreilmeier-Berger, Theresa; Hyndman, Philip S; Janout, Hannah; Assenmacher, Charles-Antoine; Bartenschlager, Florian; Bolfa, Pompei; Dark, Michael J; Klang, Andrea; Klopfleisch, Robert; Merz, Sophie; Richter, Barbara; Schulman, F Yvonne; Ganz, Jonathan; Scharinger, Josef; Aubreville, Marc; Winkler, Stephan M; Bertram, Christof A

Purification Analysis, Intracellular Tracking, and Colocalization of Extracellular Vesicles Using Atomic Force and 3D Single-Molecule Localization Microscopy

利用原子力显微镜和三维单分子定位显微镜进行细胞外囊泡的纯化分析、细胞内追踪和共定位

期刊:Analytical Chemistry

影响因子:6.7

doi:10.1021/acs.analchem.3c00144

Puthukodan, Sujitha; Hofmann, Martina; Mairhofer, Mario; Janout, Hannah; Schurr, Jonas; Hauser, Fabian; Naderer, Christoph; Preiner, Johannes; Winkler, Stephan; Sivun, Dmitry; Jacak, Jaroslaw

Histological classification of canine and feline lymphoma using a modular approach based on deep learning and advanced image processing

基于深度学习和先进图像处理的模块化方法对犬猫淋巴瘤进行组织学分类

期刊:Scientific Reports

影响因子:3.9

doi:10.1038/s41598-023-46607-w

Haghofer, Andreas; Fuchs-Baumgartinger, Andrea; Lipnik, Karoline; Klopfleisch, Robert; Aubreville, Marc; Scharinger, Josef; Weissenböck, Herbert; Winkler, Stephan M; Bertram, Christof A

淋巴瘤

发表日期：2023

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U-Net based vessel segmentation for murine brains with small micro-magnetic resonance imaging reference datasets

基于U-Net的小鼠脑血管分割及小型微磁共振成像参考数据集

期刊:PLoS One

影响因子:2.6

doi:10.1371/journal.pone.0291946

Praschl, Christoph; Zopf, Lydia M; Kiemeyer, Emma; Langthallner, Ines; Ritzberger, Daniel; Slowak, Adrian; Weigl, Martin; Blüml, Valentin; Nešić, Nebojša; Stojmenović, Miloš; Kniewallner, Kathrin M; Aigner, Ludwig; Winkler, Stephan; Walter, Andreas

神经科学

发表日期：2023

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Reduction of A-to-I RNA editing in the failing human heart regulates formation of circular RNAs

人类心脏衰竭中 A-to-I RNA 编辑的减少调节环状 RNA 的形成

期刊:Basic Research in Cardiology

影响因子:7.5

doi:10.1007/s00395-022-00940-9

Karoline E Kokot, Jasmin M Kneuer, David John, Sabine Rebs, Maximilian N Möbius-Winkler, Stephan Erbe, Marion Müller, Michael Andritschke, Susanne Gaul, Bilal N Sheikh, Jan Haas, Holger Thiele, Oliver J Müller, Susanne Hille, Florian Leuschner, Stefanie Dimmeler, Katrin Streckfuss-Bömeke, Benjamin M

ImmunoDataAnalyzer: a bioinformatics pipeline for processing barcoded and UMI tagged immunological NGS data

ImmunoDataAnalyzer：用于处理条形码和UMI标记的免疫学NGS数据的生物信息学流程

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/s12859-021-04535-4

Vetter, Julia; Schaller, Susanne; Heinzel, Andreas; Aschauer, Constantin; Reindl-Schwaighofer, Roman; Jelencsics, Kira; Hu, Karin; Oberbauer, Rainer; Winkler, Stephan M

免疫/内分泌

发表日期：2022

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Laser-facilitated epicutaneous immunotherapy with hypoallergenic beta-glucan neoglycoconjugates suppresses lung inflammation and avoids local side effects in a mouse model of allergic asthma.

在过敏性哮喘小鼠模型中，采用低过敏性β-葡聚糖新糖缀合物进行激光辅助经皮免疫疗法可抑制肺部炎症并避免局部副作用

期刊:Allergy

影响因子:12

doi:10.1111/all.14481

Korotchenko Evgeniia, SchieÃl Viktoria, Scheiblhofer Sandra, Schubert Mario, Dall Elfriede, Joubert Isabella A, Strandt Helen, Neuper Theresa, Sarajlic Muamera, Bauer Renate, Geppert Mark, Joedicke David, Wildner Sabrina, Schaller Susanne, Winkler Stephan, Gadermaier Gabriele, Horejs-Hoeck Jutta, Weiss Richard

MS Amanda 2.0: Advancements in the standalone implementation

MS Amanda 2.0：独立实现方面的进展

期刊:Rapid Communications in Mass Spectrometry

影响因子:1.7

doi:10.1002/rcm.9088

Dorfer, Viktoria; Strobl, Marina; Winkler, Stephan; Mechtler, Karl

多发性硬化症

发表日期：2021

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Use of Secondary Reflectors for Enhanced ESWT Treatment of the Penis

利用二次反射器增强体外冲击波疗法治疗阴茎

Nuclear pleomorphism in canine cutaneous mast cell tumors: Comparison of reproducibility and prognostic relevance between estimates, manual morphometry, and algorithmic morphometry

犬皮肤肥大细胞瘤的核多形性：估计值、手动形态测量和算法形态测量之间可重复性和预后相关性的比较

Automated Nuclear Morphometry: A Deep Learning Approach for Prognostication in Canine Pulmonary Carcinoma to Enhance Reproducibility

自动化核形态测量：一种用于犬肺癌预后预测的深度学习方法，以提高预测结果的可重复性

Purification Analysis, Intracellular Tracking, and Colocalization of Extracellular Vesicles Using Atomic Force and 3D Single-Molecule Localization Microscopy

利用原子力显微镜和三维单分子定位显微镜进行细胞外囊泡的纯化分析、细胞内追踪和共定位

Histological classification of canine and feline lymphoma using a modular approach based on deep learning and advanced image processing

基于深度学习和先进图像处理的模块化方法对犬猫淋巴瘤进行组织学分类

U-Net based vessel segmentation for murine brains with small micro-magnetic resonance imaging reference datasets

基于U-Net的小鼠脑血管分割及小型微磁共振成像参考数据集

Reduction of A-to-I RNA editing in the failing human heart regulates formation of circular RNAs

人类心脏衰竭中 A-to-I RNA 编辑的减少调节环状 RNA 的形成

ImmunoDataAnalyzer: a bioinformatics pipeline for processing barcoded and UMI tagged immunological NGS data

ImmunoDataAnalyzer：用于处理条形码和UMI标记的免疫学NGS数据的生物信息学流程

Laser-facilitated epicutaneous immunotherapy with hypoallergenic beta-glucan neoglycoconjugates suppresses lung inflammation and avoids local side effects in a mouse model of allergic asthma.

在过敏性哮喘小鼠模型中，采用低过敏性β-葡聚糖新糖缀合物进行激光辅助经皮免疫疗法可抑制肺部炎症并避免局部副作用

MS Amanda 2.0: Advancements in the standalone implementation

MS Amanda 2.0：独立实现方面的进展