日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Spotiphy enables single-cell spatial whole transcriptomics across an entire section

Spotiphy能够对整个切片进行单细胞空间全转录组学分析

Yang, Jiyuan; Zheng, Ziqian; Jiao, Yun; Yu, Kaiwen; Bhatara, Sheetal; Yang, Xu; Natarajan, Sivaraman; Zhang, Jiahui; Pan, Qingfei; Easton, John; Yan, Koon-Kiu; Peng, Junmin; Liu, Kaibo; Yu, Jiyang

scMINER: a mutual information-based framework for clustering and hidden driver inference from single-cell transcriptomics data

scMINER:一种基于互信息的单细胞转录组数据聚类和隐藏驱动基因推断框架

Pan, Qingfei; Ding, Liang; Hladyshau, Siarhei; Yao, Xiangyu; Zhou, Jiayu; Yan, Lei; Dhungana, Yogesh; Shi, Hao; Qian, Chenxi; Dong, Xinran; Burdyshaw, Chad; Veloso, Joao Pedro; Khatamian, Alireza; Xie, Zhen; Risch, Isabel; Yang, Xu; Yang, Jiyuan; Huang, Xin; Fang, Jason; Jain, Anuj; Jain, Arihant; Rusch, Michael; Brewer, Michael; Peng, Junmin; Yan, Koon-Kiu; Chi, Hongbo; Yu, Jiyang

Preclinical development of lentiviral vector gene therapy for Diamond-Blackfan anemia syndrome.

针对Diamond-Blackfan贫血综合征的慢病毒载体基因疗法的临床前开发

Bhoopalan Senthil Velan, Mayuranathan Thiyagaraj, Liu Nana, Mayberry Kalin, Yao Yu, Zhang Jingjing, Métais Jean-Yves, Yan Koon-Kiu, Throm Robert E, Ellis Steven R, Ju Yan, Han Lei, Suryaprakash Shruthi, Palmer Lance E, Zhou Sheng, Yu Jiyang, Cheng Yong, Yen Jonathan S, Gottschalk Stephen, Weiss Mitchell J

NetBID2 provides comprehensive hidden driver analysis

NetBID2 提供全面的隐藏驱动因素分析

Dong, Xinran; Ding, Liang; Thrasher, Andrew; Wang, Xinge; Liu, Jingjing; Pan, Qingfei; Rash, Jordan; Dhungana, Yogesh; Yang, Xu; Risch, Isabel; Li, Yuxin; Yan, Lei; Rusch, Michael; McLeod, Clay; Yan, Koon-Kiu; Peng, Junmin; Chi, Hongbo; Zhang, Jinghui; Yu, Jiyang

Supervised enhancer prediction with epigenetic pattern recognition and targeted validation

基于表观遗传模式识别和靶向验证的监督式增强子预测

Sethi, Anurag; Gu, Mengting; Gumusgoz, Emrah; Chan, Landon; Yan, Koon-Kiu; Rozowsky, Joel; Barozzi, Iros; Afzal, Veena; Akiyama, Jennifer A; Plajzer-Frick, Ingrid; Yan, Chengfei; Novak, Catherine S; Kato, Momoe; Garvin, Tyler H; Pham, Quan; Harrington, Anne; Mannion, Brandon J; Lee, Elizabeth A; Fukuda-Yuzawa, Yoko; Visel, Axel; Dickel, Diane E; Yip, Kevin Y; Sutton, Richard; Pennacchio, Len A; Gerstein, Mark

An integrative ENCODE resource for cancer genomics

癌症基因组学综合性ENCODE资源

Zhang, Jing; Lee, Donghoon; Dhiman, Vineet; Jiang, Peng; Xu, Jie; McGillivray, Patrick; Yang, Hongbo; Liu, Jason; Meyerson, William; Clarke, Declan; Gu, Mengting; Li, Shantao; Lou, Shaoke; Xu, Jinrui; Lochovsky, Lucas; Ung, Matthew; Ma, Lijia; Yu, Shan; Cao, Qin; Harmanci, Arif; Yan, Koon-Kiu; Sethi, Anurag; Gürsoy, Gamze; Schoenberg, Michael Rutenberg; Rozowsky, Joel; Warrell, Jonathan; Emani, Prashant; Yang, Yucheng T; Galeev, Timur; Kong, Xiangmeng; Liu, Shuang; Li, Xiaotong; Krishnan, Jayanth; Feng, Yanlin; Rivera-Mulia, Juan Carlos; Adrian, Jessica; Broach, James R; Bolt, Michael; Moran, Jennifer; Fitzgerald, Dominic; Dileep, Vishnu; Liu, Tingting; Mei, Shenglin; Sasaki, Takayo; Trevilla-Garcia, Claudia; Wang, Su; Wang, Yanli; Zang, Chongzhi; Wang, Daifeng; Klein, Robert J; Snyder, Michael; Gilbert, David M; Yip, Kevin; Cheng, Chao; Yue, Feng; Liu, X Shirley; White, Kevin P; Gerstein, Mark

Network Approaches for Dissecting the Immune System

利用网络方法剖析免疫系统

Hao Shi; Yan, Koon-Kiu; Ding, Liang; Qian, Chenxi; Chi, Hongbo; Yu, Jiyang

The corrected gene proximity map for analyzing the 3D genome organization using Hi-C data

利用Hi-C数据分析3D基因组结构的校正基因邻近图

Ye, Cheng; Paccanaro, Alberto; Gerstein, Mark; Yan, Koon-Kiu

The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors

ModERN资源:数百种果蝇和秀丽隐杆线虫转录因子的全基因组结合谱

Kudron, Michelle M; Victorsen, Alec; Gevirtzman, Louis; Hillier, LaDeana W; Fisher, William W; Vafeados, Dionne; Kirkey, Matt; Hammonds, Ann S; Gersch, Jeffery; Ammouri, Haneen; Wall, Martha L; Moran, Jennifer; Steffen, David; Szynkarek, Matt; Seabrook-Sturgis, Samantha; Jameel, Nader; Kadaba, Madhura; Patton, Jaeda; Terrell, Robert; Corson, Mitch; Durham, Timothy J; Park, Soo; Samanta, Swapna; Han, Mei; Xu, Jinrui; Yan, Koon-Kiu; Celniker, Susan E; White, Kevin P; Ma, Lijia; Gerstein, Mark; Reinke, Valerie; Waterston, Robert H

MrTADFinder: A network modularity based approach to identify topologically associating domains in multiple resolutions

MrTADFinder:一种基于网络模块性的方法,用于识别多分辨率下拓扑关联的域

Yan, Koon-Kiu; Lou, Shaoke; Gerstein, Mark