日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

iPepGen: a modular, immunopeptidogenomic analysis pipeline for discovery, verification, and prioritization of cancer peptide neoantigen candidates

iPepGen:一种模块化的免疫肽基因组学分析流程,用于发现、验证和优先筛选癌症肽新抗原候选物。

Mehta, Subina; Wagner, Reid; Do, Katherine T; Johnson, James E; Yu, Fengchao; Jubenville, Tyler; Richards, Kyle; Coleman, Suzanne; Popescu, Flavia E; Nesvizhskii, Alexey I; Largaespada, David A; Jagtap, Pratik D; Griffin, Timothy J

Single-Cell Proteomics of Human Peripheral Blood Mononuclear Cells Exceeding 600 Cells per Day

每日采集超过600个细胞的人类外周血单核细胞的单细胞蛋白质组学研究

Fulcher, James M; Kwon, Yumi; Dawar, Pranav; Kumar, Rashmi; Williams, Sarah M; Miller, Patricia; Liyu, Andrey; Chen, Liang; Orton, Daniel J; Olson, Heather M; Yu, Fengchao; Nesvizhskii, Alexey I; Fortier, Julie; Vij, Ravi; Jayasinghe, Reyka; Ding, Li; Zhu, Ying; Paša-Tolić, Ljiljana

Expanding Glycopeptide Identification with Match-Between-Glycans in FragPipe

利用 FragPipe 中的糖链间匹配扩展糖肽鉴定

Shen, Jiechen; Polasky, Daniel A; Jager, Shelley; Yu, Fengchao; Heck, Albert J R; Reiding, Karli R; Nesvizhskii, Alexey I

Profiling the proteome-wide selectivity of diverse electrophiles

对多种亲电试剂的蛋白质组选择性进行分析

Zanon, Patrick R A; Yu, Fengchao; Musacchio, Patricia Z; Lewald, Lisa; Zollo, Michael; Krauskopf, Kristina; Mrdović, Dario; Raunft, Patrick; Maher, Thomas E; Cigler, Marko; Chang, Christopher J; Lang, Kathrin; Toste, F Dean; Nesvizhskii, Alexey I; Hacker, Stephan M

diaTracer enables spectrum-centric analysis of diaPASEF proteomics data

diaTracer能够对diaPASEF蛋白质组学数据进行以光谱为中心的分析。

Li, Kai; Teo, Guo Ci; Yang, Kevin L; Yu, Fengchao; Nesvizhskii, Alexey I

Koina: Democratizing machine learning for proteomics research

Koina:让机器学习在蛋白质组学研究中普及化

Lautenbacher, Ludwig; Yang, Kevin L; Kockmann, Tobias; Panse, Christian; Gabriel, Wassim; Bold, Dulguun; Kahl, Elias; Chambers, Matthew; MacLean, Brendan X; Li, Kai; Yu, Fengchao; Searle, Brian C; Wilburn, Damien Beau; Shahneh, Mohammad Reza Zare; Hong, Yuhui; Tang, Haixu; Wang, Mingxun; Gabriels, Ralf; Bouwmeester, Robbin; Devreese, Robbe; Angelis, Jesse; Sabidó, Eduard; Schmidt, Tobias K; Nesvizhskii, Alexey I; Wilhelm, Mathias

MSFragger-DDA+ enhances peptide identification sensitivity with full isolation window search

MSFragger-DDA+ 通过全隔离窗口搜索提高肽段鉴定灵敏度

Yu, Fengchao; Deng, Yamei; Nesvizhskii, Alexey I

Benchmarking SILAC Proteomics Workflows and Data Analysis Platforms

SILAC蛋白质组学工作流程和数据分析平台基准测试

Frankenfield, Ashley M; Yang, Kevin L; Mazli, Wan Nur Atiqah Binti; Shih, Jamison; Yu, Fengchao; Lo, Edwin; Nesvizhskii, Alexey I; Hao, Ling

Breaking Boundaries in Histone Modification MS-Based Detection: A Tailored Search Strategy for Unrestricted Identification of Novel Epigenetic Marks

突破组蛋白修饰质谱检测的界限:一种用于无限制鉴定新型表观遗传标记的定制搜索策略

Vai, Alessandro; Noberini, Roberta; Graziadei, Andrea; Polasky, Daniel A; Yu, Fengchao; Nesvizhskii, Alexey I; Bonaldi, Tiziana

Mapping Nanoscale‐To‐Single‐Cell Phosphoproteomic Landscape by Chip‐DIA (Adv. Sci. 1/2025)

利用芯片DIA技术绘制纳米尺度到单细胞磷酸化蛋白质组图谱(Adv. Sci. 1/2025)

Huang, Fei; Tamma, Venkata Ananth; Mardy, Zahra; Burdett, Jonathan; Wickramasinghe, H Kumar; Muneer, Gul; Gebreyesus, Sofani Tafesse; Chen, Ciao‐Syuan; Lee, Tzu‐Tsung; Yu, Fengchao; Lin, Chih‐An; Hsieh, Min‐Shu; Nesvizhskii, Alexey I; Ho, Chao‐Chi; Yu, Sung‐Liang; Tu, Hsiung‐Lin; Chen, Yu‐Ju