日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A birth certificate for data to improve findability, accountability, and traceability

为数据提供出生证明,以提高可查找性、问责制和可追溯性

Li, Rongbin; Das, Avisha; Yang, Yuntao; Li, Zhao; Hong, Na; Xu, Hua; Martone, Maryann; Zheng, W Jim

eSIG-Net: Accurate prediction of single-mutation induced perturbations on protein interactions using a language model

eSIG-Net:利用语言模型精确预测单突变对蛋白质相互作用的影响

Pan, Xingxin; Shrawat, Aditya; Raghavan, Sidharth; Dong, Chuanpeng; Yang, Yuntao; Li, Zhao; Zheng, W Jim; Eckhardt, S Gail; Wu, Erxi; Bass, Juan I Fuxman; Jarosz, Daniel F; Chen, Sidi; McGrail, Daniel J; Sheynkman, Gloria M; Huang, Jason H; Sahni, Nidhi; Yi, S Stephen

CeLLTra: aligning cell names with gene expression via a pathway-informed transformer

CeLLTra:通过通路信息转换器将细胞名称与基因表达进行匹配

Li, Zhao; Zheng, Zaiyi; Li, Rongbin; Chen, Wenbo; Yang, Yuntao; Ali, Meer A; Li, Jundong; Zheng, W Jim

Benchmarking large language models for biomedical natural language processing applications and recommendations

对用于生物医学自然语言处理应用的大型语言模型进行基准测试和推荐

Chen, Qingyu; Hu, Yan; Peng, Xueqing; Xie, Qianqian; Jin, Qiao; Gilson, Aidan; Singer, Maxwell B; Ai, Xuguang; Lai, Po-Ting; Wang, Zhizheng; Keloth, Vipina K; Raja, Kalpana; Huang, Jimin; He, Huan; Lin, Fongci; Du, Jingcheng; Zhang, Rui; Zheng, W Jim; Adelman, Ron A; Lu, Zhiyong; Xu, Hua

A Hedgehog-Foxf axis coordinates dental follicle-derived alveolar bone formation.

Hedgehog-Foxf轴协调牙囊衍生的牙槽骨形成

Nagata Mizuki, Gadhvi Gaurav T, Komori Taishi, Arai Yuki, Tsutsumi-Arai Chiaki, Chu Angel Ka Yan, Nye Seth N, Yang Yuntao, Orikasa Shion, Takahashi Akira, Carlsson Peter, Zheng W Jim, Welch Joshua D, Ono Noriaki, Ono Wanida

ASpdb: an integrative knowledgebase of human protein isoforms from experimental and AI-predicted structures

ASpdb:一个整合了来自实验和人工智能预测结构的人类蛋白质亚型知识库

Yang, Yuntao; Kumar, Himansu; Xie, Yuhan; Li, Zhao; Li, Rongbin; Chen, Wenbo; Diala, Chiamaka S; Ali, Meer A; Xu, Yi; Wu, Albon; Hosseini, Sayed-Rzgar; Bi, Erfei; Zhao, Hongyu; Kim, Pora; Zheng, W Jim

Ensemble pretrained language models to extract biomedical knowledge from literature

集成预训练语言模型从文献中提取生物医学知识

Li, Zhao; Wei, Qiang; Huang, Liang-Chin; Li, Jianfu; Hu, Yan; Chuang, Yao-Shun; He, Jianping; Das, Avisha; Keloth, Vipina Kuttichi; Yang, Yuntao; Diala, Chiamaka S; Roberts, Kirk E; Tao, Cui; Jiang, Xiaoqian; Zheng, W Jim; Xu, Hua

Sequence-to-expression approach to identify etiological non-coding DNA variations in P53 and cMYC-driven diseases

利用序列-表达分析方法鉴定P53和cMYC驱动疾病中的致病性非编码DNA变异

Kin, Katherine; Bhogale, Shounak; Zhu, Lisha; Thomas, Derrick; Bertol, Jessica; Zheng, W Jim; Sinha, Saurabh; Fakhouri, Walid D

A guide to the BRAIN Initiative Cell Census Network data ecosystem

脑计划细胞普查网络数据生态系统指南

Hawrylycz, Michael; Martone, Maryann E; Ascoli, Giorgio A; Bjaalie, Jan G; Dong, Hong-Wei; Ghosh, Satrajit S; Gillis, Jesse; Hertzano, Ronna; Haynor, David R; Hof, Patrick R; Kim, Yongsoo; Lein, Ed; Liu, Yufeng; Miller, Jeremy A; Mitra, Partha P; Mukamel, Eran; Ng, Lydia; Osumi-Sutherland, David; Peng, Hanchuan; Ray, Patrick L; Sanchez, Raymond; Regev, Aviv; Ropelewski, Alex; Scheuermann, Richard H; Tan, Shawn Zheng Kai; Thompson, Carol L; Tickle, Timothy; Tilgner, Hagen; Varghese, Merina; Wester, Brock; White, Owen; Zeng, Hongkui; Aevermann, Brian; Allemang, David; Ament, Seth; Athey, Thomas L; Baker, Cody; Baker, Katherine S; Baker, Pamela M; Bandrowski, Anita; Banerjee, Samik; Bishwakarma, Prajal; Carr, Ambrose; Chen, Min; Choudhury, Roni; Cool, Jonah; Creasy, Heather; D'Orazi, Florence; Degatano, Kylee; Dichter, Benjamin; Ding, Song-Lin; Dolbeare, Tim; Ecker, Joseph R; Fang, Rongxin; Fillion-Robin, Jean-Christophe; Fliss, Timothy P; Gee, James; Gillespie, Tom; Gouwens, Nathan; Zhang, Guo-Qiang; Halchenko, Yaroslav O; Harris, Nomi L; Herb, Brian R; Hintiryan, Houri; Hood, Gregory; Horvath, Sam; Huo, Bingxing; Jarecka, Dorota; Jiang, Shengdian; Khajouei, Farzaneh; Kiernan, Elizabeth A; Kir, Huseyin; Kruse, Lauren; Lee, Changkyu; Lelieveldt, Boudewijn; Li, Yang; Liu, Hanqing; Liu, Lijuan; Markuhar, Anup; Mathews, James; Mathews, Kaylee L; Mezias, Chris; Miller, Michael I; Mollenkopf, Tyler; Mufti, Shoaib; Mungall, Christopher J; Orvis, Joshua; Puchades, Maja A; Qu, Lei; Receveur, Joseph P; Ren, Bing; Sjoquist, Nathan; Staats, Brian; Tward, Daniel; van Velthoven, Cindy T J; Wang, Quanxin; Xie, Fangming; Xu, Hua; Yao, Zizhen; Yun, Zhixi; Zhang, Yun Renee; Zheng, W Jim; Zingg, Brian

Prediction of Brain Metastases Development in Patients With Lung Cancer by Explainable Artificial Intelligence From Electronic Health Records

利用可解释人工智能技术,基于电子健康记录预测肺癌患者脑转移的发生

Li, Zhao; Li, Rongbin; Zhou, Yujia; Rasmy, Laila; Zhi, Degui; Zhu, Ping; Dono, Antonio; Jiang, Xiaoqian; Xu, Hua; Esquenazi, Yoshua; Zheng, W Jim