日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Pan-cancer immune and stromal deconvolution predicts clinical outcomes and mutation profiles

泛癌免疫和基质去卷积预测临床结果和突变谱

Bhinder, Bhavneet; Friedl, Verena; Sethuraman, Sunantha; Risso, Davide; Chiotti, Kami E; Mashl, R Jay; Ellrott, Kyle P; Lee, Jordan A; Wong, Christopher K; Gyan, Kofi; Deshpande, Aditya; Imielinski, Marcin; Bareja, Rohan; Stuart, Josh; Peto, Myron; Hoadley, Katherine A; Lazar, Alexander J; Cherniack, Andrew D; Zhu, Jingchun; Cao, Shaolong; Rubin, Mark; Wang, Wenyi; Bathe, Oliver F; Robine, Nicolas; Ding, Li; Laird, Peter W; Zhou, Wanding; Shen, Hui; Thorsson, Vésteinn; Yeh, Jen Jen; Bailey, Matthew H; Zhou, Daniel Cui; Peng, Xianlu L; Goldman, Mary; Li, Yongsheng; Korkut, Anil; Sahni, Nidhi; Hayes, D Neil; Mensah, Michael K A; Felau, Ina; Kemal, Anab; Caesar-Johnson, Samantha; Demchok, John A; Yang, Liming; Ferguson, Martin L; Tarnuzzer, Roy; Wang, Zhining; Zenklusen, Jean C; Spellman, Paul; Elemento, Olivier

Proteogenomic data and resources for pan-cancer analysis

用于泛癌分析的蛋白质基因组学数据和资源

Li, Yize; Dou, Yongchao; Da Veiga Leprevost, Felipe; Geffen, Yifat; Calinawan, Anna P; Aguet, François; Akiyama, Yo; Anand, Shankara; Birger, Chet; Cao, Song; Chaudhary, Rekha; Chilappagari, Padmini; Cieslik, Marcin; Colaprico, Antonio; Zhou, Daniel Cui; Day, Corbin; Domagalski, Marcin J; Esai Selvan, Myvizhi; Fenyö, David; Foltz, Steven M; Francis, Alicia; Gonzalez-Robles, Tania; Gümüş, Zeynep H; Heiman, David; Holck, Michael; Hong, Runyu; Hu, Yingwei; Jaehnig, Eric J; Ji, Jiayi; Jiang, Wen; Katsnelson, Lizabeth; Ketchum, Karen A; Klein, Robert J; Lei, Jonathan T; Liang, Wen-Wei; Liao, Yuxing; Lindgren, Caleb M; Ma, Weiping; Ma, Lei; MacCoss, Michael J; Martins Rodrigues, Fernanda; McKerrow, Wilson; Nguyen, Ngoc; Oldroyd, Robert; Pilozzi, Alexander; Pugliese, Pietro; Reva, Boris; Rudnick, Paul; Ruggles, Kelly V; Rykunov, Dmitry; Savage, Sara R; Schnaubelt, Michael; Schraink, Tobias; Shi, Zhiao; Singhal, Deepak; Song, Xiaoyu; Storrs, Erik; Terekhanova, Nadezhda V; Thangudu, Ratna R; Thiagarajan, Mathangi; Wang, Liang-Bo; Wang, Joshua M; Wang, Ying; Wen, Bo; Wu, Yige; Wyczalkowski, Matthew A; Xin, Yi; Yao, Lijun; Yi, Xinpei; Zhang, Hui; Zhang, Qing; Zuhl, Maya; Getz, Gad; Ding, Li; Nesvizhskii, Alexey I; Wang, Pei; Robles, Ana I; Zhang, Bing; Payne, Samuel H

Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma

作者更正:表观遗传学和转录组学特征揭示了透明细胞肾细胞癌的进展标志物和关键通路

Wu, Yige; Terekhanova, Nadezhda V; Caravan, Wagma; Naser Al Deen, Nataly; Lal, Preet; Chen, Siqi; Mo, Chia-Kuei; Cao, Song; Li, Yize; Karpova, Alla; Liu, Ruiyang; Zhao, Yanyan; Shinkle, Andrew; Strunilin, Ilya; Weimholt, Cody; Sato, Kazuhito; Yao, Lijun; Serasanambati, Mamatha; Yang, Xiaolu; Wyczalkowski, Matthew; Zhu, Houxiang; Zhou, Daniel Cui; Jayasinghe, Reyka G; Mendez, Daniel; Wendl, Michael C; Clark, David; Newton, Chelsea; Ruan, Yijun; Reimers, Melissa A; Pachynski, Russell K; Kinsinger, Chris; Jewell, Scott; Chan, Daniel W; Zhang, Hui; Chaudhuri, Aadel A; Chheda, Milan G; Humphreys, Benjamin D; Mesri, Mehdi; Rodriguez, Henry; Hsieh, James J; Ding, Li; Chen, Feng

Differential chromatin accessibility and transcriptional dynamics define breast cancer subtypes and their lineages

染色质可及性和转录动力学的差异决定了乳腺癌亚型及其谱系。

Iglesia, Michael D; Jayasinghe, Reyka G; Chen, Siqi; Terekhanova, Nadezhda V; Herndon, John M; Storrs, Erik; Karpova, Alla; Zhou, Daniel Cui; Al Deen, Nataly Naser; Shinkle, Andrew T; Lu, Rita Jui-Hsien; Caravan, Wagma; Houston, Andrew; Zhao, Yanyan; Sato, Kazuhito; Lal, Preet; Street, Cherease; Rodrigues, Fernanda Martins; Southard-Smith, Austin N; Targino da Costa, André Luiz N; Zhu, Houxiang; Mo, Chia-Kuei; Crowson, Lisa; Fulton, Robert S; Wyczalkowski, Matthew A; Fronick, Catrina C; Fulton, Lucinda A; Sun, Hua; Davies, Sherri R; Appelbaum, Elizabeth L; Chasnoff, Sara E; Carmody, Madelyn; Brooks, Candace; Liu, Ruiyang; Wendl, Michael C; Oh, Clara; Bender, Diane; Cruchaga, Carlos; Harari, Oscar; Bredemeyer, Andrea; Lavine, Kory; Bose, Ron; Margenthaler, Julie; Held, Jason M; Achilefu, Samuel; Ademuyiwa, Foluso; Aft, Rebecca; Ma, Cynthia; Colditz, Graham A; Ju, Tao; Oh, Stephen T; Fitzpatrick, James; Hwang, E Shelley; Shoghi, Kooresh I; Chheda, Milan G; Veis, Deborah J; Chen, Feng; Fields, Ryan C; Gillanders, William E; Ding, Li

Mitochondrial fitness and cancer risk

线粒体功能与癌症风险

Kossenkov, Andrew V; Milcarek, Andrew; Notta, Faiyaz; Jang, Gun-Ho; Wilson, Julie M; Gallinger, Steven; Zhou, Daniel Cui; Ding, Li; Ghosh, Jagadish C; Perego, Michela; Morotti, Annamaria; Locatelli, Marco; Robert, Marie E; Vaira, Valentina; Altieri, Dario C

Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.

从蛋白质基因组学角度深入了解 HPV 阴性头颈部鳞状细胞癌的生物学和治疗方法

Huang Chen, Chen Lijun, Savage Sara R, Eguez Rodrigo Vargas, Dou Yongchao, Li Yize, da Veiga Leprevost Felipe, Jaehnig Eric J, Lei Jonathan T, Wen Bo, Schnaubelt Michael, Krug Karsten, Song Xiaoyu, Cieślik Marcin, Chang Hui-Yin, Wyczalkowski Matthew A, Li Kai, Colaprico Antonio, Li Qing Kay, Clark David J, Hu Yingwei, Cao Liwei, Pan Jianbo, Wang Yuefan, Cho Kyung-Cho, Shi Zhiao, Liao Yuxing, Jiang Wen, Anurag Meenakshi, Ji Jiayi, Yoo Seungyeul, Zhou Daniel Cui, Liang Wen-Wei, Wendl Michael, Vats Pankaj, Carr Steven A, Mani D R, Zhang Zhen, Qian Jiang, Chen Xi S, Pico Alexander R, Wang Pei, Chinnaiyan Arul M, Ketchum Karen A, Kinsinger Christopher R, Robles Ana I, An Eunkyung, Hiltke Tara, Mesri Mehdi, Thiagarajan Mathangi, Weaver Alissa M, Sikora Andrew G, Lubiński Jan, Wierzbicka Małgorzata, Wiznerowicz Maciej, Satpathy Shankha, Gillette Michael A, Miles George, Ellis Matthew J, Omenn Gilbert S, Rodriguez Henry, Boja Emily S, Dhanasekaran Saravana M, Ding Li, Nesvizhskii Alexey I, El-Naggar Adel K, Chan Daniel W, Zhang Hui, Zhang Bing

Spatially interacting phosphorylation sites and mutations in cancer

癌症中空间相互作用的磷酸化位点和突变

Huang, Kuan-Lin; Scott, Adam D; Zhou, Daniel Cui; Wang, Liang-Bo; Weerasinghe, Amila; Elmas, Abdulkadir; Liu, Ruiyang; Wu, Yige; Wendl, Michael C; Wyczalkowski, Matthew A; Baral, Jessika; Sengupta, Sohini; Lai, Chin-Wen; Ruggles, Kelly; Payne, Samuel H; Raphael, Benjamin; Fenyö, David; Chen, Ken; Mills, Gordon; Ding, Li

MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data

MSIsensor-ct:利用cfDNA测序数据进行微卫星不稳定性检测

Han, Xinyin; Zhang, Shuying; Zhou, Daniel Cui; Wang, Dongliang; He, Xiaoyu; Yuan, Danyang; Li, Ruilin; He, Jiayin; Duan, Xiaohong; Wendl, Michael C; Ding, Li; Niu, Beifang