SUMMARY: Measuring cellular energetics is essential to understanding a matrix's (e.g. cell, tissue, or biofluid) metabolic state. The Agilent Seahorse machine is a common method to measure real-time cellular energetics, but existing analysis tools are highly manual or lack functionality. The Cellular Energetics Analysis Software (ceas) R package fills this analytical gap by providing modular and automated Seahorse data analysis and visualization. AVAILABILITY AND IMPLEMENTATION: ceas is available on CRAN (https://cran.r-project.org/package=ceas). Source code and installable tarballs are freely available for download at https://github.com/jamespeapen/ceas/releases/ under the MIT license. Package documentation may be found at https://jamespeapen.github.io/ceas/. ceas is implemented in R and is supported on macOS, Windows and Linux.
ceas: an R package for Seahorse data analysis and visualization.
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作者:House Rachel Rae J, Eapen James P, Shen Hui, Graveel Carrie R, Steensma Matthew R
| 期刊: | Bioinformatics | 影响因子: | 5.400 |
| 时间: | 2024 | 起止号: | 2024 Aug 2; 40(8):btae503 |
| doi: | 10.1093/bioinformatics/btae503 | ||
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