Adenine base editing reduces misfolded protein accumulation and toxicity in alpha-1 antitrypsin deficient patient iPSC-hepatocytes

腺嘌呤碱基编辑可减少 α-1 抗胰蛋白酶缺乏症患者 iPSC 肝细胞中错误折叠蛋白质的积累和毒性

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作者:Rhiannon B Werder, Joseph E Kaserman, Michael S Packer, Jonathan Lindstrom-Vautrin, Carlos Villacorta-Martin, Lauren E Young, Yvonne Aratyn-Schaus, Francine Gregoire, Andrew A Wilson

Abstract

Alpha-1 antitrypsin deficiency (AATD) is most commonly caused by the Z mutation, a single-base substitution that leads to AAT protein misfolding and associated liver and lung disease. In this study, we apply adenine base editors to correct the Z mutation in patient induced pluripotent stem cells (iPSCs) and iPSC-derived hepatocytes (iHeps). We demonstrate that correction of the Z mutation in patient iPSCs reduces aberrant AAT accumulation and increases its secretion. Adenine base editing (ABE) of differentiated iHeps decreases ER stress in edited cells, as demonstrated by single-cell RNA sequencing. We find ABE to be highly efficient in iPSCs and do not identify off-target genomic mutations by whole-genome sequencing. These results reveal the feasibility and utility of base editing to correct the Z mutation in AATD patient cells.

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