Patient-derived models recapitulate heterogeneity of molecular signatures and drug response in pediatric high-grade glioma

患者衍生模型重现儿童高级别胶质瘤分子特征和药物反应的异质性

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作者:Chen He #, Ke Xu #, Xiaoyan Zhu #, Paige S Dunphy #, Brian Gudenas, Wenwei Lin, Nathaniel Twarog, Laura D Hover, Chang-Hyuk Kwon, Lawryn H Kasper, Junyuan Zhang, Xiaoyu Li, James Dalton, Barbara Jonchere, Kimberly S Mercer, Duane G Currier, William Caufield, Yingzhe Wang, Jia Xie, Alberto Broniscer,

Abstract

Pediatric high-grade glioma (pHGG) is a major contributor to cancer-related death in children. In vitro and in vivo disease models reflecting the intimate connection between developmental context and pathogenesis of pHGG are essential to advance understanding and identify therapeutic vulnerabilities. Here we report establishment of 21 patient-derived pHGG orthotopic xenograft (PDOX) models and eight matched cell lines from diverse groups of pHGG. These models recapitulate histopathology, DNA methylation signatures, mutations and gene expression patterns of the patient tumors from which they were derived, and include rare subgroups not well-represented by existing models. We deploy 16 new and existing cell lines for high-throughput screening (HTS). In vitro HTS results predict variable in vivo response to PI3K/mTOR and MEK pathway inhibitors. These unique new models and an online interactive data portal for exploration of associated detailed molecular characterization and HTS chemical sensitivity data provide a rich resource for pediatric brain tumor research.

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