Network assessment of demethylation treatment in melanoma: Differential transcriptome-methylome and antigen profile signatures

黑色素瘤去甲基化治疗的网络评估:差异转录组-甲基化组和抗原谱特征

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作者:Zhijie Jiang, Caterina Cinti, Monia Taranta, Elisabetta Mattioli, Elisa Schena, Sakshi Singh, Rimpi Khurana, Giovanna Lattanzi, Nicholas F Tsinoremas, Enrico Capobianco

Background

In melanoma, like in other cancers, both genetic alterations and epigenetic underlie the metastatic process. These effects are usually measured by changes in both methylome and transcriptome profiles, whose cross-correlation remains uncertain. We aimed to assess at systems scale the significance of epigenetic treatment in melanoma cells with different metastatic potential.

Conclusion

Demethylation treatment strongly affects early melanoma progression by re-activating many genes. This evidence suggests that the efficacy of this type of therapeutic intervention is potentially high at the pre-metastatic stages. The biomarkers that can be assessed through antigens seem informative depending on the metastatic conditions, and networks help to elucidate the assessment of possible targets actionability.

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