Structure-based design of native-like HIV-1 envelope trimers to silence non-neutralizing epitopes and eliminate CD4 binding

基于结构的天然样HIV-1包膜三聚体设计,可沉默非中和表位并消除CD4结合

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作者:Daniel W Kulp ,Jon M Steichen ,Matthias Pauthner ,Xiaozhen Hu ,Torben Schiffner ,Alessia Liguori ,Christopher A Cottrell ,Colin Havenar-Daughton ,Gabriel Ozorowski ,Erik Georgeson ,Oleksandr Kalyuzhniy ,Jordan R Willis ,Michael Kubitz ,Yumiko Adachi ,Samantha M Reiss ,Mia Shin ,Natalia de Val ,Andrew B Ward ,Shane Crotty ,Dennis R Burton ,William R Schief

Abstract

Elicitation of broadly neutralizing antibodies (bnAbs) is a primary HIV vaccine goal. Native-like trimers mimicking virion-associated spikes present nearly all bnAb epitopes and are therefore promising vaccine antigens. However, first generation native-like trimers expose epitopes for non-neutralizing antibodies (non-nAbs), which may hinder bnAb induction. We here employ computational and structure-guided design to develop improved native-like trimers that reduce exposure of non-nAb epitopes in the V3-loop and trimer base, minimize both CD4 reactivity and CD4-induced non-nAb epitope exposure, and increase thermal stability while maintaining bnAb antigenicity. In rabbit immunizations with native-like trimers of the 327c isolate, improved trimers suppress elicitation of V3-directed and tier-1 neutralizing antibodies and induce robust autologous tier-2 neutralization, unlike a first-generation trimer. The improved native-like trimers from diverse HIV isolates, and the design methods, have promise to assist in the development of a HIV vaccine.

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