Spatial transcriptomics analysis of zone-dependent hepatic ischemia-reperfusion injury murine model

区域依赖性肝缺血再灌注损伤小鼠模型的空间转录组学分析

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作者:Jiaqi Xin, Ting Yang, Xiaoyi Wu, Yingting Wu, Yi Liu, Xuan Liu, Mengxi Jiang, Wei Gao

Abstract

Hepatic ischemia-reperfusion (I/R) injury is a common complication in liver transplantation. The connection between I/R-induced injury response and liver heterogeneity has yet to be fully understood. In this study, we converge histopathological examination with spatial transcriptomics to dissect I/R injury patterns and their associated molecular changes, which reveal that the pericentral zones are most sensitive to I/R injury in terms of histology, transcriptomic changes, and cell type dynamics. Bioinformatic analysis of I/R injury-related pathways predicts that celastrol can protect against liver I/R injury by inducing ischemic pre-conditioning, which is experimentally validated. Mechanistically, celastrol likely implements its protective effect against I/R injury by activating HIF1α signaling and represents a potential strategy for resolving liver I/R.

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