Identification of protein aggregates in the aging vertebrate brain with prion-like and phase-separation properties

在衰老脊椎动物脑中鉴定具有朊病毒样特性和相分离特性的蛋白质聚集体

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作者:Itamar Harel ,Yiwen R Chen ,Inbal Ziv ,Param Priya Singh ,Daniel Heinzer ,Paloma Navarro Negredo ,Uri Goshtchevsky ,Wei Wang ,Gwendoline Astre ,Eitan Moses ,Andrew McKay ,Ben E Machado ,Katja Hebestreit ,Sifei Yin ,Alejandro Sánchez Alvarado ,Daniel F Jarosz ,Anne Brunet

Abstract

Protein aggregation, which can sometimes spread in a prion-like manner, is a hallmark of neurodegenerative diseases. However, whether prion-like aggregates form during normal brain aging remains unknown. Here, we use quantitative proteomics in the African turquoise killifish to identify protein aggregates that accumulate in old vertebrate brains. These aggregates are enriched for prion-like RNA-binding proteins, notably the ATP-dependent RNA helicase DDX5. We validate that DDX5 forms aggregate-like puncta in the brains of old killifish and mice. Interestingly, DDX5's prion-like domain allows these aggregates to propagate across many generations in yeast. In vitro, DDX5 phase separates into condensates. Mutations that abolish DDX5 prion propagation also impair the protein's ability to phase separate. DDX5 condensates exhibit enhanced enzymatic activity, but they can mature into inactive, solid aggregates. Our findings suggest that protein aggregates with prion-like properties form during normal brain aging, which could have implications for the age-dependency of cognitive decline. Keywords: CP: Cell biology; CP: Neuroscience; N. furzeri; aggregates; aging; killifish; phase separation.

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