Genome-wide association and expression quantitative trait loci in cattle reveals common genes regulating mammalian fertility

牛的全基因组关联和表达数量性状基因座揭示了调节哺乳动物生育能力的常见基因

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作者:Mehrnush Forutan, Bailey N Engle, Amanda J Chamberlain, Elizabeth M Ross, Loan T Nguyen, Michael J D'Occhio, Alf Collins Snr, Elise A Kho, Geoffry Fordyce, Shannon Speight, Michael E Goddard, Ben J Hayes

Abstract

Most genetic variants associated with fertility in mammals fall in non-coding regions of the genome and it is unclear how these variants affect fertility. Here we use genome-wide association summary statistics for Heifer puberty (pubertal or not at 600 days) from 27,707 Bos indicus, Bos taurus and crossbred cattle; multi-trait GWAS signals from 2119 indicine cattle for four fertility traits, including days to calving, age at first calving, pregnancy status, and foetus age in weeks (assessed by rectal palpation of the foetus); and expression quantitative trait locus for whole blood from 489 indicine cattle, to identify 87 putatively functional genes affecting cattle fertility. Our analysis reveals a significant overlap between the set of cattle and previously reported human fertility-related genes, impling the existence of a shared pool of genes that regulate fertility in mammals. These findings are crucial for developing approaches to improve fertility in cattle and potentially other mammals.

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