Abstract
OBJECTIVE: Whole breast segmentation is an essential task in quantitative analysis of breast MRI for cancer risk assessment. It is challenging, mainly, because the chest-wall line (CWL) can be very difficult to locate due to its spatially varying appearance-caused by both nature and imaging artifacts-and neighboring distracting structures. This paper proposes an automatic three-dimensional (3-D) segmentation method, termed DeepSeA, of whole breast for breast MRI. METHODS: DeepSeA distinguishes itself from previous methods in three aspects. First, it reformulates the challenging problem of CWL localization as an equivalent problem that optimizes a smooth depth field and so fully utilizes the CWL's 3-D continuity. Second, it employs a localized self-adapting algorithm to adjust to the CWL's spatial variation. Third, it applies to breast MRI data in both sagittal and axial orientations equally well without training. RESULTS: A representative set of 99 breast MRI scans with varying imaging protocols is used for evaluation. Experimental results with expert-outlined reference standard show that DeepSeA can segment breasts accurately: the average Dice similarity coefficients, sensitivity, specificity, and CWL deviation error are 96.04%, 97.27%, 98.77%, and 1.63 mm, respectively. In addition, the configuration of DeepSeA is generalized based on experimental findings, for application to broad prospective data. CONCLUSION: A fully automatic method-DeepSeA-for whole breast segmentation in sagittal and axial breast MRI is reported. SIGNIFICANCE: DeepSeA can facilitate cancer risk assessment with breast MRI.