Whole-genome sequencing and comparative genomic analysis of Irpex lacteus isolated from the female reproductive tract

对从雌性生殖道分离的乳白伊尔佩克斯菌进行全基因组测序和比较基因组分析

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Abstract

Irpex lacteus is a fungus typically found on angiosperm branches and trunks. Here, we report the isolation of a novel strain of I. lacteus from the cervix uteri of a female patient diagnosed with endometriosis and COVID-19 at Beijing Obstetrics and Gynecology Hospital, Capital Medical University. Using whole-genome sequencing, we generated a high-quality draft genome for this human-derived strain. Comparative genomic analysis revealed significant variations amongst I. lacteus strains colonizing distinct environments. Functional annotations indicated that environmental adaptation has influenced specific functional traits in the strains. Moreover, potential virulence factors were identified, implying a risk of opportunistic infections associated with I. lacteus. This study elucidates the adaptive characteristics of I. lacteus across ecological niches and provides genomic insights into its opportunistic colonization.

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