Wastewater and marine bioindicators surveillance to anticipate COVID-19 prevalence and to explore SARS-CoV-2 diversity by next generation sequencing: One-year study

通过废水和海洋生物指标监测预测 COVID-19 流行情况并通过下一代测序探索 SARS-CoV-2 多样性:为期一年的研究

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作者:Beatriz Novoa, Raquel Ríos-Castro, Irene Otero-Muras, Susana Gouveia, Adrián Cabo, Amaro Saco, Magalí Rey-Campos, Manuel Pájaro, Noelia Fajar, Raquel Aranguren, Alejandro Romero, Antonella Panebianco, Lorena Valdés, Pedro Payo, Antonio A Alonso, Antonio Figueras, Claudio Cameselle

Abstract

This study presents the results of SARS-CoV-2 surveillance in sewage water of 11 municipalities and marine bioindicators in Galicia (NW of Spain) from May 2020 to May 2021. An integrated pipeline was developed including sampling, pre-treatment and biomarker quantification, RNA detection, SARS-CoV-2 sequencing, mechanistic mathematical modeling and forecasting. The viral load in the inlet stream to the wastewater treatment plants (WWTP) was used to detect new outbreaks of COVID-19, and the data of viral load in the wastewater in combination with data provided by the health system was used to predict the evolution of the pandemic in the municipalities under study within a time horizon of 7 days. Moreover, the study shows that the viral load was eliminated from the treated sewage water in the WWTP, mainly in the biological reactors and the disinfection system. As a result, we detected a minor impact of the virus in the marine environment through the analysis of seawater, marine sediments and, wild and aquacultured mussels in the final discharge point of the WWTP.

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